Difference between revisions of "TSS:Hg 111886.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=29 |entrez_id=1488 |gc_percent=0.636816 |gene_alias=- |gene_description=C-terminal binding protein 2 |gene_name=CTBP2 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000411419.6:0 uc001lih.5:0 BC047018:0 NM_001083914:-10 ENST00000530884.1:-16 uc057wqp.1:-16 ENST00000476817.1:-125 uc057wqo.1:-125 NM_001329:486 NM_001290214:486 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=125161045 | ||
|entrez_id=1488 | |entrez_id=1488 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=C-terminal binding protein 2 | |gene_description=C-terminal binding protein 2 | ||
| − | |gene_name=CTBP2 | + | |gene_id=1488 |
| + | |gene_name=C-terminal binding protein 2 | ||
| + | |gene_source=HGNC:2495 | ||
| + | |gene_symbol=CTBP2 | ||
| + | |gene_synonyms=ribeye | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2495 | ||
|nearest_ensembl=ENSG00000175029 | |nearest_ensembl=ENSG00000175029 | ||
|nearest_promoter_id=NM_001083914 | |nearest_promoter_id=NM_001083914 | ||
|nearest_refseq=NM_001329 | |nearest_refseq=NM_001329 | ||
|nearest_unigene=Hs.501345 | |nearest_unigene=Hs.501345 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=125161019 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000411419.6 uc001lih.5 BC047018 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111886.1 | |tss_id=hg_111886.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P56545 | ||
}} | }} | ||
Revision as of 02:11, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000411419.6 uc001lih.5 BC047018 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000411419.6:0 uc001lih.5:0 BC047018:0 NM_001083914:-10 ENST00000530884.1:-16 uc057wqp.1:-16 ENST00000476817.1:-125 uc057wqo.1:-125 NM_001329:486 NM_001290214:486 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_001083914 |
| Entrez ID: | 1488 |
| Nearest Unigene: | Hs.501345 |
| Nearest Refseq: | NM_001329 |
| Nearest Ensembl: | ENSG00000175029 |
| Gene Name: | C-terminal binding protein 2 |
| Gene Alias: | - |
| Gene Description: | C-terminal binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
