Difference between revisions of "TSS:Hg 112267.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=315 |entrez_id=6181 |gc_percent=0.716418 |gene_alias=D11S2243E|LP2|P2|RPP2 |gene_description=ribosomal protein lateral stalk sub...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LP2= | ||
| + | |P2= | ||
| + | |RPP2= | ||
| + | |all_trans=ENST00000530398.1:0 uc057xnp.1:0 KJ892048:0 CR542248:0 CR542212:0 ENST00000526222.5:117 uc057xnq.1:117 ENST00000524867.1:-219 uc057xno.1:-219 AK056066:-225 BC007573:-231 BC062314:-235 ENST00000530797.5:-238 uc057xnn.1:-238 AK311954:-254 AK130959:-254 M17887:-254 D28411:-255 BC005920:-255 ENST00000532004.5:-257 uc057xnm.1:-257 BC005354:-257 NM_001004:-286 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=315 | |distance_to_tss=315 | ||
| + | |end=810281 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=D11S2243E|LP2|P2|RPP2 | |gene_alias=D11S2243E|LP2|P2|RPP2 | ||
|gene_description=ribosomal protein lateral stalk subunit P2 | |gene_description=ribosomal protein lateral stalk subunit P2 | ||
| − | |gene_name=RPLP2 | + | |gene_id=6181 |
| + | |gene_name=ribosomal protein lateral stalk subunit P2 | ||
| + | |gene_source=HGNC:10377 | ||
| + | |gene_symbol=RPLP2 | ||
| + | |gene_synonyms=LP2 MGC71408 P2 RPP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10377 | ||
|nearest_ensembl=ENSG00000177600 | |nearest_ensembl=ENSG00000177600 | ||
|nearest_promoter_id=NM_001004 | |nearest_promoter_id=NM_001004 | ||
|nearest_refseq=NM_001004 | |nearest_refseq=NM_001004 | ||
|nearest_unigene=Hs.437594 | |nearest_unigene=Hs.437594 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=810221 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000530398.1 uc057xnp.1 KJ892048 CR542248 CR542212 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_112267.1 | |tss_id=hg_112267.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H0YDD8 | ||
}} | }} | ||
Revision as of 02:28, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000530398.1 uc057xnp.1 KJ892048 CR542248 CR542212 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000530398.1:0 uc057xnp.1:0 KJ892048:0 CR542248:0 CR542212:0 ENST00000526222.5:117 uc057xnq.1:117 ENST00000524867.1:-219 uc057xno.1:-219 AK056066:-225 BC007573:-231 BC062314:-235 ENST00000530797.5:-238 uc057xnn.1:-238 AK311954:-254 AK130959:-254 M17887:-254 D28411:-255 BC005920:-255 ENST00000532004.5:-257 uc057xnm.1:-257 BC005354:-257 NM_001004:-286 |
TATA-Box annotation
| Distance to TSS: | 315 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | D11S2243E |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
