Difference between revisions of "TSS:Hg 112269.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=892 |entrez_id=619565 |gc_percent=0.641791 |gene_alias=ACA52 |gene_description="small nucleolar RNA, H/ACA box 52" |gene_name=S...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000527517.1:-481 uc057xns.1:-481 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-481 | ||
|distance_to_tss=892 | |distance_to_tss=892 | ||
| + | |end=812587 | ||
|entrez_id=619565 | |entrez_id=619565 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=ACA52 | |gene_alias=ACA52 | ||
|gene_description="small nucleolar RNA, H/ACA box 52" | |gene_description="small nucleolar RNA, H/ACA box 52" | ||
| − | |gene_name= | + | |gene_id=6181 |
| + | |gene_name=ribosomal protein lateral stalk subunit P2 | ||
| + | |gene_source=HGNC:10377 | ||
| + | |gene_symbol=RPLP2 | ||
| + | |gene_synonyms=LP2 MGC71408 P2 RPP2 | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:10377 | ||
|nearest_ensembl=ENSG00000199785 | |nearest_ensembl=ENSG00000199785 | ||
|nearest_promoter_id=NR_002585 | |nearest_promoter_id=NR_002585 | ||
|nearest_refseq=NR_002585 | |nearest_refseq=NR_002585 | ||
|nearest_unigene=Hs.689713 | |nearest_unigene=Hs.689713 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=812559 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000527517.1 uc057xns.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_112269.1 | |tss_id=hg_112269.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 02:28, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000527517.1 uc057xns.1 |
|---|---|
| Distance: | -481 |
| Num_trans: | 2 |
| All_trans: | ENST00000527517.1:-481 uc057xns.1:-481 |
TATA-Box annotation
| Distance to TSS: | 892 |
|---|---|
| Nearest PromoterID: | NR_002585 |
| Entrez ID: | 619565 |
| Nearest Unigene: | Hs.689713 |
| Nearest Refseq: | NR_002585 |
| Nearest Ensembl: | ENSG00000199785 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | ACA52 |
| Gene Description: | "small nucleolar RNA, H/ACA box 52" |
| Gene Type: | snoRNA |
| CpG%: | 0.005 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
