Difference between revisions of "TSS:Hg 112295.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-683 |entrez_id=283229 |gc_percent=0.721393 |gene_alias=EFCAB4A |gene_description=calcium release activated channel regulator 2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000528542.6:0 uc057xog.1:0 BC073821:17 ENST00000530183.1:-258 uc057xof.1:-258 ENST00000534606.1:-274 uc057xoe.1:-274 ENST00000527089.5:-306 uc057xod.1:-306 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=0 | ||
|distance_to_tss=-683 | |distance_to_tss=-683 | ||
| + | |end=827601 | ||
|entrez_id=283229 | |entrez_id=283229 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=EFCAB4A | |gene_alias=EFCAB4A | ||
|gene_description=calcium release activated channel regulator 2B | |gene_description=calcium release activated channel regulator 2B | ||
| − | |gene_name=CRACR2B | + | |gene_id=283229 |
| + | |gene_name=calcium release activated channel regulator 2B | ||
| + | |gene_source=HGNC:28703 | ||
| + | |gene_symbol=CRACR2B | ||
| + | |gene_synonyms=MGC45840 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28703 | ||
|nearest_ensembl=ENSG00000177685 | |nearest_ensembl=ENSG00000177685 | ||
|nearest_promoter_id=NM_173584 | |nearest_promoter_id=NM_173584 | ||
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=827553 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000528542.6 uc057xog.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_112295.1 | |tss_id=hg_112295.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N4Y2 | ||
}} | }} | ||
Revision as of 02:29, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000528542.6 uc057xog.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000528542.6:0 uc057xog.1:0 BC073821:17 ENST00000530183.1:-258 uc057xof.1:-258 ENST00000534606.1:-274 uc057xoe.1:-274 ENST00000527089.5:-306 uc057xod.1:-306 |
TATA-Box annotation
| Distance to TSS: | -683 |
|---|---|
| Nearest PromoterID: | NM_173584 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | calcium release activated channel regulator 2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
