Difference between revisions of "TSS:Hg 112305.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=1307 |entrez_id=283229 |gc_percent=0.661692 |gene_alias=EFCAB4A |gene_description=calcium release activated channel regulator 2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000528694.1:-254 uc057xok.1:-254 AK097334:-254 ENST00000527763.5:-256 uc057xoj.1:-256 AK127926:-256 ENST00000530688.5:-264 uc057xoi.1:-264 AK075180:-264 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=-254 | ||
|distance_to_tss=1307 | |distance_to_tss=1307 | ||
| + | |end=829573 | ||
|entrez_id=283229 | |entrez_id=283229 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=EFCAB4A | |gene_alias=EFCAB4A | ||
|gene_description=calcium release activated channel regulator 2B | |gene_description=calcium release activated channel regulator 2B | ||
| − | |gene_name=CRACR2B | + | |gene_id=283229 |
| + | |gene_name=calcium release activated channel regulator 2B | ||
| + | |gene_source=HGNC:28703 | ||
| + | |gene_symbol=CRACR2B | ||
| + | |gene_synonyms=MGC45840 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28703 | ||
|nearest_ensembl=ENSG00000177685 | |nearest_ensembl=ENSG00000177685 | ||
|nearest_promoter_id=NM_001286606 | |nearest_promoter_id=NM_001286606 | ||
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=829560 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000528694.1 uc057xok.1 AK097334 | ||
| + | |tss_classification=no | ||
|tss_id=hg_112305.1 | |tss_id=hg_112305.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 02:29, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000528694.1 uc057xok.1 AK097334 |
|---|---|
| Distance: | -254 |
| Num_trans: | 9 |
| All_trans: | ENST00000528694.1:-254 uc057xok.1:-254 AK097334:-254 ENST00000527763.5:-256 uc057xoj.1:-256 AK127926:-256 ENST00000530688.5:-264 uc057xoi.1:-264 AK075180:-264 |
TATA-Box annotation
| Distance to TSS: | 1307 |
|---|---|
| Nearest PromoterID: | NM_001286606 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | calcium release activated channel regulator 2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
