Difference between revisions of "TSS:Hg 112905.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=182 |entrez_id=8495 |gc_percent=0.761194 |gene_alias=Cclp1 |gene_description=PPFIA binding protein 2 |gene_name=PPFIBP2 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK308398:36 AK001131:36 BC021714:-110 ENST00000299492.8:-162 uc001mfj.6:-162 ENST00000528947.5:-164 uc057ypb.1:-164 NM_003621:-167 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=36 | ||
|distance_to_tss=182 | |distance_to_tss=182 | ||
| + | |end=7513963 | ||
|entrez_id=8495 | |entrez_id=8495 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=Cclp1 | |gene_alias=Cclp1 | ||
|gene_description=PPFIA binding protein 2 | |gene_description=PPFIA binding protein 2 | ||
| − | |gene_name=PPFIBP2 | + | |gene_id=8495 |
| + | |gene_name=PPFIA binding protein 2 | ||
| + | |gene_source=HGNC:9250 | ||
| + | |gene_symbol=PPFIBP2 | ||
| + | |gene_synonyms=Cclp1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
|nearest_promoter_id=NM_003621 | |nearest_promoter_id=NM_003621 | ||
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=7513931 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK308398 AK001131 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_112905.1 | |tss_id=hg_112905.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KM46 | ||
}} | }} | ||
Revision as of 02:55, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK308398 AK001131 |
|---|---|
| Distance: | 36 |
| Num_trans: | 8 |
| All_trans: | AK308398:36 AK001131:36 BC021714:-110 ENST00000299492.8:-162 uc001mfj.6:-162 ENST00000528947.5:-164 uc057ypb.1:-164 NM_003621:-167 |
TATA-Box annotation
| Distance to TSS: | 182 |
|---|---|
| Nearest PromoterID: | NM_003621 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
