Difference between revisions of "TSS:Hg 112914.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-20170 |entrez_id=8495 |gc_percent=0.562189 |gene_alias=Cclp1 |gene_description=PPFIA binding protein 2 |gene_name=PPFIBP2 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000525597.5:16 uc057ypi.1:16 AK293669:18 ENST00000529021.1:93 uc057ypj.1:93 ENST00000532926.5:-242 uc001mfk.1:-242 AK097449:-242 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=16 | ||
|distance_to_tss=-20170 | |distance_to_tss=-20170 | ||
| + | |end=7577024 | ||
|entrez_id=8495 | |entrez_id=8495 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=Cclp1 | |gene_alias=Cclp1 | ||
|gene_description=PPFIA binding protein 2 | |gene_description=PPFIA binding protein 2 | ||
| − | |gene_name=PPFIBP2 | + | |gene_id=8495 |
| + | |gene_name=PPFIA binding protein 2 | ||
| + | |gene_source=HGNC:9250 | ||
| + | |gene_symbol=PPFIBP2 | ||
| + | |gene_synonyms=Cclp1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
|nearest_promoter_id=NM_001256568 | |nearest_promoter_id=NM_001256568 | ||
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=7577008 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000525597.5 uc057ypi.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_112914.1 | |tss_id=hg_112914.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PJA0 | ||
}} | }} | ||
Revision as of 02:55, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000525597.5 uc057ypi.1 |
|---|---|
| Distance: | 16 |
| Num_trans: | 8 |
| All_trans: | ENST00000525597.5:16 uc057ypi.1:16 AK293669:18 ENST00000529021.1:93 uc057ypj.1:93 ENST00000532926.5:-242 uc001mfk.1:-242 AK097449:-242 |
TATA-Box annotation
| Distance to TSS: | -20170 |
|---|---|
| Nearest PromoterID: | NM_001256568 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
