Difference between revisions of "TSS:Hg 116661.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-15 |entrez_id=91894 |gc_percent=0.537313 |gene_alias=- |gene_description=chromosome 11 open reading frame 52 |gene_name=C11orf...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000278601.5:10 NM_080659:10 uc058hgo.1:10 BC008501:46 AK057948:72 KJ899932:105 ENST00000527286.5:130 uc058hgp.1:130 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=10 | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
| + | |end=111918867 | ||
|entrez_id=91894 | |entrez_id=91894 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 11 open reading frame 52 | |gene_description=chromosome 11 open reading frame 52 | ||
| − | |gene_name=C11orf52 | + | |gene_id=91894 |
| + | |gene_name=chromosome 11 open reading frame 52 | ||
| + | |gene_source=HGNC:30531 | ||
| + | |gene_symbol=C11orf52 | ||
| + | |gene_synonyms=FLJ25219 MGC14839 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30531 | ||
|nearest_ensembl=ENSG00000149300 | |nearest_ensembl=ENSG00000149300 | ||
|nearest_promoter_id=NM_080659 | |nearest_promoter_id=NM_080659 | ||
|nearest_refseq=NM_080659 | |nearest_refseq=NM_080659 | ||
|nearest_unigene=Hs.97013 | |nearest_unigene=Hs.97013 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=111918856 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000278601.5 NM_080659 uc058hgo.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_116661.1 | |tss_id=hg_116661.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96A22 | ||
}} | }} | ||
Revision as of 05:35, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000278601.5 NM_080659 uc058hgo.1 |
|---|---|
| Distance: | 10 |
| Num_trans: | 8 |
| All_trans: | ENST00000278601.5:10 NM_080659:10 uc058hgo.1:10 BC008501:46 AK057948:72 KJ899932:105 ENST00000527286.5:130 uc058hgp.1:130 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_080659 |
| Entrez ID: | 91894 |
| Nearest Unigene: | Hs.97013 |
| Nearest Refseq: | NM_080659 |
| Nearest Ensembl: | ENSG00000149300 |
| Gene Name: | chromosome 11 open reading frame 52 |
| Gene Alias: | - |
| Gene Description: | chromosome 11 open reading frame 52 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
