Difference between revisions of "TSS:Hg 116666.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-2911 |entrez_id=85458 |gc_percent=0.502488 |gene_alias=CCD1 |gene_description=DIX domain containing 1 |gene_name=DIXDC1 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000529012.1:7 uc058hgq.1:7 | ||
| + | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=7 | ||
|distance_to_tss=-2911 | |distance_to_tss=-2911 | ||
| + | |end=111924238 | ||
|entrez_id=85458 | |entrez_id=85458 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=CCD1 | |gene_alias=CCD1 | ||
|gene_description=DIX domain containing 1 | |gene_description=DIX domain containing 1 | ||
| − | |gene_name= | + | |gene_id=91894 |
| + | |gene_name=chromosome 11 open reading frame 52 | ||
| + | |gene_source=HGNC:30531 | ||
| + | |gene_symbol=C11orf52 | ||
| + | |gene_synonyms=FLJ25219 MGC14839 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30531 | ||
|nearest_ensembl=ENSG00000150764 | |nearest_ensembl=ENSG00000150764 | ||
|nearest_promoter_id=NM_001278542 | |nearest_promoter_id=NM_001278542 | ||
|nearest_refseq=NM_033425 | |nearest_refseq=NM_033425 | ||
|nearest_unigene=Hs.655626 | |nearest_unigene=Hs.655626 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=111924228 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000529012.1 uc058hgq.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_116666.1 | |tss_id=hg_116666.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 05:35, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000529012.1 uc058hgq.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 2 |
| All_trans: | ENST00000529012.1:7 uc058hgq.1:7 |
TATA-Box annotation
| Distance to TSS: | -2911 |
|---|---|
| Nearest PromoterID: | NM_001278542 |
| Entrez ID: | 85458 |
| Nearest Unigene: | Hs.655626 |
| Nearest Refseq: | NM_033425 |
| Nearest Ensembl: | ENSG00000150764 |
| Gene Name: | chromosome 11 open reading frame 52 |
| Gene Alias: | CCD1 |
| Gene Description: | DIX domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
