Difference between revisions of "TSS:Hg 117855.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=44 |entrez_id=66005 |gc_percent=0.597015 |gene_alias=GL008|SI-CLP|SICLP |gene_description=chitinase domain containing 1 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SI-CLP= | ||
| + | |SICLP= | ||
| + | |all_trans=ENST00000449825.5:-42 ENST00000533056.5:-42 NM_001142675:-42 uc010qww.3:-42 uc057xqh.1:-42 ENST00000533059.5:193 uc057xqi.1:193 ENST00000525840.1:212 uc057xql.1:212 ENST00000528154.1:239 uc057xqm.1:239 AK301245:331 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-42 | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
| + | |end=915016 | ||
|entrez_id=66005 | |entrez_id=66005 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=GL008|SI-CLP|SICLP | |gene_alias=GL008|SI-CLP|SICLP | ||
|gene_description=chitinase domain containing 1 | |gene_description=chitinase domain containing 1 | ||
| − | |gene_name=CHID1 | + | |gene_id=66005 |
| + | |gene_name=chitinase domain containing 1 | ||
| + | |gene_source=HGNC:28474 | ||
| + | |gene_symbol=CHID1 | ||
| + | |gene_synonyms=FLJ42707 MGC3234 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28474 | ||
|nearest_ensembl=ENSG00000177830 | |nearest_ensembl=ENSG00000177830 | ||
|nearest_promoter_id=NM_001142675 | |nearest_promoter_id=NM_001142675 | ||
|nearest_refseq=NM_023947 | |nearest_refseq=NM_023947 | ||
|nearest_unigene=Hs.144468 | |nearest_unigene=Hs.144468 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=915012 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_117855.1 | |tss_id=hg_117855.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PRL3 Q9BWS9 | ||
}} | }} | ||
Revision as of 06:25, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000449825.5 ENST00000533056.5 NM_001142675 uc010qww.3 uc057xqh.1 |
|---|---|
| Distance: | -42 |
| Num_trans: | 12 |
| All_trans: | ENST00000449825.5:-42 ENST00000533056.5:-42 NM_001142675:-42 uc010qww.3:-42 uc057xqh.1:-42 ENST00000533059.5:193 uc057xqi.1:193 ENST00000525840.1:212 uc057xql.1:212 ENST00000528154.1:239 uc057xqm.1:239 AK301245:331 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001142675 |
| Entrez ID: | 66005 |
| Nearest Unigene: | Hs.144468 |
| Nearest Refseq: | NM_023947 |
| Nearest Ensembl: | ENSG00000177830 |
| Gene Name: | chitinase domain containing 1 |
| Gene Alias: | GL008 |
| Gene Description: | chitinase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
