Difference between revisions of "TSS:Hg 117878.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=20120 |entrez_id=4588 |gc_percent=0.572139 |gene_alias=MUC-6 |gene_description="mucin 6, oligomeric mucus/gel-forming" |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=U97698:-145 AK092533:-193 AK098503:-405 ENST00000532016.1:427 uc057xrk.1:427 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-145 | ||
|distance_to_tss=20120 | |distance_to_tss=20120 | ||
| + | |end=1016592 | ||
|entrez_id=4588 | |entrez_id=4588 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=MUC-6 | |gene_alias=MUC-6 | ||
|gene_description="mucin 6, oligomeric mucus/gel-forming" | |gene_description="mucin 6, oligomeric mucus/gel-forming" | ||
| − | |gene_name=MUC6 | + | |gene_id=4588 |
| + | |gene_name="mucin 6, oligomeric mucus/gel-forming" | ||
| + | |gene_source=HGNC:7517 | ||
| + | |gene_symbol=MUC6 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7517 | ||
|nearest_ensembl=ENSG00000184956 | |nearest_ensembl=ENSG00000184956 | ||
|nearest_promoter_id=NM_005961 | |nearest_promoter_id=NM_005961 | ||
|nearest_refseq=NM_005961 | |nearest_refseq=NM_005961 | ||
|nearest_unigene=Hs.528432 | |nearest_unigene=Hs.528432 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=1016579 | ||
| + | |strand=- | ||
| + | |transcript_name=U97698 | ||
| + | |tss_classification=no | ||
|tss_id=hg_117878.1 | |tss_id=hg_117878.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 06:26, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U97698 |
|---|---|
| Distance: | -145 |
| Num_trans: | 5 |
| All_trans: | U97698:-145 AK092533:-193 AK098503:-405 ENST00000532016.1:427 uc057xrk.1:427 |
TATA-Box annotation
| Distance to TSS: | 20120 |
|---|---|
| Nearest PromoterID: | NM_005961 |
| Entrez ID: | 4588 |
| Nearest Unigene: | Hs.528432 |
| Nearest Refseq: | NM_005961 |
| Nearest Ensembl: | ENSG00000184956 |
| Gene Name: | "mucin 6, oligomeric mucus/gel-forming" |
| Gene Alias: | MUC-6 |
| Gene Description: | "mucin 6, oligomeric mucus/gel-forming" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
