Difference between revisions of "TSS:Hg 118259.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=11761 |entrez_id=677833 |gc_percent=0.477612 |gene_alias=ACA54 |gene_description="small nucleolar RNA, H/ACA box 54" |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000526023.5:90 uc057xzl.1:90 AK095320:119 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=90 | ||
|distance_to_tss=11761 | |distance_to_tss=11761 | ||
| + | |end=2952137 | ||
|entrez_id=677833 | |entrez_id=677833 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=ACA54 | |gene_alias=ACA54 | ||
|gene_description="small nucleolar RNA, H/ACA box 54" | |gene_description="small nucleolar RNA, H/ACA box 54" | ||
| − | |gene_name= | + | |gene_id=4676 |
| + | |gene_name=nucleosome assembly protein 1 like 4 | ||
| + | |gene_source=HGNC:7640 | ||
| + | |gene_symbol=NAP1L4 | ||
| + | |gene_synonyms=NAP2 | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:7640 | ||
|nearest_ensembl=ENSG00000207008 | |nearest_ensembl=ENSG00000207008 | ||
|nearest_promoter_id=NR_002982 | |nearest_promoter_id=NR_002982 | ||
|nearest_refseq=NR_002982 | |nearest_refseq=NR_002982 | ||
|nearest_unigene=Hs.689696 | |nearest_unigene=Hs.689696 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=2952126 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000526023.5 uc057xzl.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_118259.1 | |tss_id=hg_118259.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 06:43, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000526023.5 uc057xzl.1 |
|---|---|
| Distance: | 90 |
| Num_trans: | 3 |
| All_trans: | ENST00000526023.5:90 uc057xzl.1:90 AK095320:119 |
TATA-Box annotation
| Distance to TSS: | 11761 |
|---|---|
| Nearest PromoterID: | NR_002982 |
| Entrez ID: | 677833 |
| Nearest Unigene: | Hs.689696 |
| Nearest Refseq: | NR_002982 |
| Nearest Ensembl: | ENSG00000207008 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | ACA54 |
| Gene Description: | "small nucleolar RNA, H/ACA box 54" |
| Gene Type: | snoRNA |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
