Difference between revisions of "TSS:Hg 118263.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=271 |entrez_id=4676 |gc_percent=0.850746 |gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 |gene_description=nucleosome assembly protein 1 li...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NAP2= | ||
| + | |NAP2L= | ||
| + | |all_trans=ENST00000430811.5:0 uc057xzt.1:0 ENST00000529361.5:-132 ENST00000528968.5:-132 ENST00000534372.1:-132 uc057xzu.1:-132 uc057xzv.1:-132 uc057yaa.1:-132 ENST00000531291.5:-133 uc057xzy.1:-133 ENST00000526842.5:-136 uc057xzx.1:-136 BC022090:-161 ENST00000448187.5:-162 uc057xzr.1:-162 AK316548:-165 AK316242:-165 ENST00000532325.6:-174 ENST00000399614.6:-174 uc057xzq.1:-174 uc057xzs.1:-174 AK299515:-174 AK316324:-195 ENST00000620138.4:-251 ENST00000380542.8:-251 ENST00000526115.5:-251 NM_005969:-251 uc010qxn.3:-251 uc001lxc.4:-251 uc010qxm.3:-251 U77456:-251 AK312599:-258 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=271 | |distance_to_tss=271 | ||
| + | |end=2992126 | ||
|entrez_id=4676 | |entrez_id=4676 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
|gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 | |gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 | ||
|gene_description=nucleosome assembly protein 1 like 4 | |gene_description=nucleosome assembly protein 1 like 4 | ||
| − | |gene_name=NAP1L4 | + | |gene_id=4676 |
| + | |gene_name=nucleosome assembly protein 1 like 4 | ||
| + | |gene_source=HGNC:7640 | ||
| + | |gene_symbol=NAP1L4 | ||
| + | |gene_synonyms=NAP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hNAP2= | ||
| + | |hgnc_mgi_id=HGNC:7640 | ||
|nearest_ensembl=ENSG00000205531 | |nearest_ensembl=ENSG00000205531 | ||
|nearest_promoter_id=NM_005969 | |nearest_promoter_id=NM_005969 | ||
|nearest_refseq=NM_005969 | |nearest_refseq=NM_005969 | ||
|nearest_unigene=Hs.731784 | |nearest_unigene=Hs.731784 | ||
| + | |num_trans=32 | ||
| + | |species=human | ||
| + | |start=2992086 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000430811.5 uc057xzt.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_118263.1 | |tss_id=hg_118263.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9J6D1 | ||
}} | }} | ||
Revision as of 06:43, 9 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000430811.5 uc057xzt.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000430811.5:0 uc057xzt.1:0 ENST00000529361.5:-132 ENST00000528968.5:-132 ENST00000534372.1:-132 uc057xzu.1:-132 uc057xzv.1:-132 uc057yaa.1:-132 ENST00000531291.5:-133 uc057xzy.1:-133 ENST00000526842.5:-136 uc057xzx.1:-136 BC022090:-161 ENST00000448187.5:-162 uc057xzr.1:-162 AK316548:-165 AK316242:-165 ENST00000532325.6:-174 ENST00000399614.6:-174 uc057xzq.1:-174 uc057xzs.1:-174 AK299515:-174 AK316324:-195 ENST00000620138.4:-251 ENST00000380542.8:-251 ENST00000526115.5:-251 NM_005969:-251 uc010qxn.3:-251 uc001lxc.4:-251 uc010qxm.3:-251 U77456:-251 AK312599:-258 |
TATA-Box annotation
| Distance to TSS: | 271 |
|---|---|
| Nearest PromoterID: | NM_005969 |
| Entrez ID: | 4676 |
| Nearest Unigene: | Hs.731784 |
| Nearest Refseq: | NM_005969 |
| Nearest Ensembl: | ENSG00000205531 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | NAP1L4b |
| Gene Description: | nucleosome assembly protein 1 like 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
