Difference between revisions of "TSS:Hg 118267.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-5 |entrez_id=4676 |gc_percent=0.636816 |gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 |gene_description=nucleosome assembly protein 1 lik...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NAP2= | ||
| + | |NAP2L= | ||
| + | |all_trans=ENST00000620138.4:0 ENST00000380542.8:0 ENST00000526115.5:0 NM_005969:0 uc010qxn.3:0 uc001lxc.4:0 uc010qxm.3:0 U77456:0 AK312599:0 AK316324:53 ENST00000532325.6:74 ENST00000399614.6:74 uc057xzq.1:74 uc057xzs.1:74 AK299515:74 AK316548:83 AK316242:83 ENST00000448187.5:86 uc057xzr.1:86 BC022090:87 ENST00000526842.5:112 uc057xzx.1:112 ENST00000531291.5:115 uc057xzy.1:115 ENST00000529361.5:116 ENST00000528968.5:116 ENST00000534372.1:116 uc057xzu.1:116 uc057xzv.1:116 uc057yaa.1:116 ENST00000430811.5:272 uc057xzt.1:272 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
| + | |end=2992391 | ||
|entrez_id=4676 | |entrez_id=4676 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 | |gene_alias=NAP1L4b|NAP2|NAP2L|hNAP2 | ||
|gene_description=nucleosome assembly protein 1 like 4 | |gene_description=nucleosome assembly protein 1 like 4 | ||
| − | |gene_name=NAP1L4 | + | |gene_id=4676 |
| + | |gene_name=nucleosome assembly protein 1 like 4 | ||
| + | |gene_source=HGNC:7640 | ||
| + | |gene_symbol=NAP1L4 | ||
| + | |gene_synonyms=NAP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hNAP2= | ||
| + | |hgnc_mgi_id=HGNC:7640 | ||
|nearest_ensembl=ENSG00000205531 | |nearest_ensembl=ENSG00000205531 | ||
|nearest_promoter_id=NM_005969 | |nearest_promoter_id=NM_005969 | ||
|nearest_refseq=NM_005969 | |nearest_refseq=NM_005969 | ||
|nearest_unigene=Hs.731784 | |nearest_unigene=Hs.731784 | ||
| + | |num_trans=32 | ||
| + | |species=human | ||
| + | |start=2992373 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000620138.4 ENST00000380542.8 ENST00000526115.5 NM_005969 uc010qxn.3 uc001lxc.4 uc010qxm.3 U77456 AK312599 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_118267.1 | |tss_id=hg_118267.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024RCC9 Q99733 | ||
}} | }} | ||
Revision as of 06:43, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000620138.4 ENST00000380542.8 ENST00000526115.5 NM_005969 uc010qxn.3 uc001lxc.4 uc010qxm.3 U77456 AK312599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000620138.4:0 ENST00000380542.8:0 ENST00000526115.5:0 NM_005969:0 uc010qxn.3:0 uc001lxc.4:0 uc010qxm.3:0 U77456:0 AK312599:0 AK316324:53 ENST00000532325.6:74 ENST00000399614.6:74 uc057xzq.1:74 uc057xzs.1:74 AK299515:74 AK316548:83 AK316242:83 ENST00000448187.5:86 uc057xzr.1:86 BC022090:87 ENST00000526842.5:112 uc057xzx.1:112 ENST00000531291.5:115 uc057xzy.1:115 ENST00000529361.5:116 ENST00000528968.5:116 ENST00000534372.1:116 uc057xzu.1:116 uc057xzv.1:116 uc057yaa.1:116 ENST00000430811.5:272 uc057xzt.1:272 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_005969 |
| Entrez ID: | 4676 |
| Nearest Unigene: | Hs.731784 |
| Nearest Refseq: | NM_005969 |
| Nearest Ensembl: | ENSG00000205531 |
| Gene Name: | nucleosome assembly protein 1 like 4 |
| Gene Alias: | NAP1L4b |
| Gene Description: | nucleosome assembly protein 1 like 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
