Difference between revisions of "TSS:Hg 118471.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=-161 |entrez_id=51700 |gc_percent=0.711443 |gene_alias=B5R.2 |gene_description=cytochrome b5 reductase 2 |gene_name=CYB5R2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000436351.2:0 uc057yqh.1:0 NM_016229:146 NR_126508:146 ENST00000299498.10:243 uc001mfm.4:243 AF169802:243 ENST00000524790.5:272 uc057ypx.1:272 BC001346:272 ENST00000526084.1:289 uc057ypz.1:289 AB209000:289 AK308543:-401 ENST00000533558.5:-433 uc009yfk.4:-433 AK290102:-433 ENST00000525307.1:-436 uc057yqi.1:-436 ENST00000527542.5:-443 uc057yqe.1:-443 ENST00000531096.5:-468 NM_001302826:-468 uc057yqd.1:-468 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=-161 | |distance_to_tss=-161 | ||
| + | |end=7673775 | ||
|entrez_id=51700 | |entrez_id=51700 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=B5R.2 | |gene_alias=B5R.2 | ||
|gene_description=cytochrome b5 reductase 2 | |gene_description=cytochrome b5 reductase 2 | ||
| − | |gene_name=CYB5R2 | + | |gene_id=51700 |
| + | |gene_name=cytochrome b5 reductase 2 | ||
| + | |gene_source=HGNC:24376 | ||
| + | |gene_symbol=CYB5R2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24376 | ||
|nearest_ensembl=ENSG00000166394 | |nearest_ensembl=ENSG00000166394 | ||
|nearest_promoter_id=NR_126508 | |nearest_promoter_id=NR_126508 | ||
|nearest_refseq=NM_016229 | |nearest_refseq=NM_016229 | ||
|nearest_unigene=Hs.414362 | |nearest_unigene=Hs.414362 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=7673743 | ||
| + | |strand=- | ||
|tata_box="59(GTGTATTTATGG,-,0.00)" | |tata_box="59(GTGTATTTATGG,-,0.00)" | ||
| + | |transcript_name=ENST00000436351.2 uc057yqh.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_118471.1 | |tss_id=hg_118471.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PRM4 | ||
}} | }} | ||
Revision as of 06:52, 9 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000436351.2 uc057yqh.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000436351.2:0 uc057yqh.1:0 NM_016229:146 NR_126508:146 ENST00000299498.10:243 uc001mfm.4:243 AF169802:243 ENST00000524790.5:272 uc057ypx.1:272 BC001346:272 ENST00000526084.1:289 uc057ypz.1:289 AB209000:289 AK308543:-401 ENST00000533558.5:-433 uc009yfk.4:-433 AK290102:-433 ENST00000525307.1:-436 uc057yqi.1:-436 ENST00000527542.5:-443 uc057yqe.1:-443 ENST00000531096.5:-468 NM_001302826:-468 uc057yqd.1:-468 |
TATA-Box annotation
| Distance to TSS: | -161 |
|---|---|
| Nearest PromoterID: | NR_126508 |
| Entrez ID: | 51700 |
| Nearest Unigene: | Hs.414362 |
| Nearest Refseq: | NM_016229 |
| Nearest Ensembl: | ENSG00000166394 |
| Gene Name: | cytochrome b5 reductase 2 |
| Gene Alias: | B5R.2 |
| Gene Description: | cytochrome b5 reductase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "59(GTGTATTTATGG,-,0.00)" |
