Difference between revisions of "TSS:Hg 119525.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-172 |entrez_id=55626 |gc_percent=0.437811 |gene_alias=DCAF3|WDR94 |gene_description=autophagy and beclin 1 regulator 1 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |WDR94= | ||
| + | |all_trans=ENST00000526606.1:115 uc058awz.1:115 NM_001267783:171 NM_001267782:171 NM_001300731:171 ENST00000528950.1:195 uc058awt.1:195 AK304530:205 ENST00000534300.5:219 uc001ncx.4:219 AB051523:219 AK000301:221 AK057896:227 ENST00000531542.1:242 uc058awx.1:242 ENST00000533727.5:292 uc001ncw.4:292 AL834190:292 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=115 | ||
|distance_to_tss=-172 | |distance_to_tss=-172 | ||
| + | |end=46594242 | ||
|entrez_id=55626 | |entrez_id=55626 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=DCAF3|WDR94 | |gene_alias=DCAF3|WDR94 | ||
|gene_description=autophagy and beclin 1 regulator 1 | |gene_description=autophagy and beclin 1 regulator 1 | ||
| − | |gene_name=AMBRA1 | + | |gene_id=55626 |
| + | |gene_name=autophagy/beclin-1 regulator 1 | ||
| + | |gene_source=HGNC:25990 | ||
| + | |gene_symbol=AMBRA1 | ||
| + | |gene_synonyms=DCAF3 FLJ20294 KIAA1736 WDR94 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25990 | ||
|nearest_ensembl=ENSG00000110497 | |nearest_ensembl=ENSG00000110497 | ||
|nearest_promoter_id=NM_001267782 | |nearest_promoter_id=NM_001267782 | ||
|nearest_refseq=NM_017749 | |nearest_refseq=NM_017749 | ||
|nearest_unigene=Hs.654644 | |nearest_unigene=Hs.654644 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=46594239 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000526606.1 uc058awz.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_119525.1 | |tss_id=hg_119525.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PL55 | ||
}} | }} | ||
Revision as of 07:37, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000526606.1 uc058awz.1 |
|---|---|
| Distance: | 115 |
| Num_trans: | 18 |
| All_trans: | ENST00000526606.1:115 uc058awz.1:115 NM_001267783:171 NM_001267782:171 NM_001300731:171 ENST00000528950.1:195 uc058awt.1:195 AK304530:205 ENST00000534300.5:219 uc001ncx.4:219 AB051523:219 AK000301:221 AK057896:227 ENST00000531542.1:242 uc058awx.1:242 ENST00000533727.5:292 uc001ncw.4:292 AL834190:292 |
TATA-Box annotation
| Distance to TSS: | -172 |
|---|---|
| Nearest PromoterID: | NM_001267782 |
| Entrez ID: | 55626 |
| Nearest Unigene: | Hs.654644 |
| Nearest Refseq: | NM_017749 |
| Nearest Ensembl: | ENSG00000110497 |
| Gene Name: | autophagy/beclin-1 regulator 1 |
| Gene Alias: | DCAF3 |
| Gene Description: | autophagy and beclin 1 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
