Difference between revisions of "TSS:Hg 121147.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-2 |entrez_id=4926 |gc_percent=0.606965 |gene_alias=NMP-22|NUMA |gene_description=nuclear mitotic apparatus protein 1 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NUMA= | ||
| + | |all_trans=ENST00000393695.7:0 ENST00000613205.4:0 ENST00000543450.1:0 NM_001286561:0 NM_006185:0 uc001orl.3:0 uc058exi.1:0 uc058eyi.1:0 BC068539:0 ENST00000541641.5:127 uc058eyd.1:127 AB621824:127 ENST00000543937.5:139 ENST00000368959.9:139 ENST00000537905.5:139 uc058ext.1:139 uc058eya.1:139 uc058eye.1:139 ENST00000546131.1:145 uc058eyh.1:145 ENST00000358965.10:166 uc001orm.3:166 Z11584:166 Z11583:170 AK307577:170 ENST00000540843.5:187 uc058exq.1:187 AB210007:187 BC027493:187 BC043499:187 ENST00000366394.7:203 uc058eyc.1:203 ENST00000537217.5:207 NR_104476:207 uc058exp.1:207 BC103765:207 ENST00000535111.5:218 uc058eyf.1:218 ENST00000541719.5:250 uc058eyb.1:250 ENST00000351960.10:292 uc001ork.3:292 BC004165:292 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
| + | |end=72080710 | ||
|entrez_id=4926 | |entrez_id=4926 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=NMP-22|NUMA | |gene_alias=NMP-22|NUMA | ||
|gene_description=nuclear mitotic apparatus protein 1 | |gene_description=nuclear mitotic apparatus protein 1 | ||
| − | |gene_name=NUMA1 | + | |gene_id=4926 |
| + | |gene_name=nuclear mitotic apparatus protein 1 | ||
| + | |gene_source=HGNC:8059 | ||
| + | |gene_symbol=NUMA1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8059 | ||
|nearest_ensembl=ENSG00000137497 | |nearest_ensembl=ENSG00000137497 | ||
|nearest_promoter_id=NM_006185 | |nearest_promoter_id=NM_006185 | ||
|nearest_refseq=NM_006185 | |nearest_refseq=NM_006185 | ||
|nearest_unigene=Hs.325978 | |nearest_unigene=Hs.325978 | ||
| + | |num_trans=43 | ||
| + | |species=human | ||
| + | |start=72080680 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000393695.7 ENST00000613205.4 ENST00000543450.1 NM_001286561 NM_006185 uc001orl.3 uc058exi.1 uc058eyi.1 BC068539 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121147.1 | |tss_id=hg_121147.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q14980 Q4LE64 | ||
}} | }} | ||
Revision as of 08:47, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000393695.7 ENST00000613205.4 ENST00000543450.1 NM_001286561 NM_006185 uc001orl.3 uc058exi.1 uc058eyi.1 BC068539 |
|---|---|
| Distance: | 0 |
| Num_trans: | 43 |
| All_trans: | ENST00000393695.7:0 ENST00000613205.4:0 ENST00000543450.1:0 NM_001286561:0 NM_006185:0 uc001orl.3:0 uc058exi.1:0 uc058eyi.1:0 BC068539:0 ENST00000541641.5:127 uc058eyd.1:127 AB621824:127 ENST00000543937.5:139 ENST00000368959.9:139 ENST00000537905.5:139 uc058ext.1:139 uc058eya.1:139 uc058eye.1:139 ENST00000546131.1:145 uc058eyh.1:145 ENST00000358965.10:166 uc001orm.3:166 Z11584:166 Z11583:170 AK307577:170 ENST00000540843.5:187 uc058exq.1:187 AB210007:187 BC027493:187 BC043499:187 ENST00000366394.7:203 uc058eyc.1:203 ENST00000537217.5:207 NR_104476:207 uc058exp.1:207 BC103765:207 ENST00000535111.5:218 uc058eyf.1:218 ENST00000541719.5:250 uc058eyb.1:250 ENST00000351960.10:292 uc001ork.3:292 BC004165:292 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_006185 |
| Entrez ID: | 4926 |
| Nearest Unigene: | Hs.325978 |
| Nearest Refseq: | NM_006185 |
| Nearest Ensembl: | ENSG00000137497 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | NMP-22 |
| Gene Description: | nuclear mitotic apparatus protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
