Difference between revisions of "TSS:Hg 622.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000251546.8:0 NM_183412:0 NM_001304791:0 uc001ask.4:0 AK055344:0 ENST00000425796.5:478 ENST00000376770.5:478 NM_033182:478 NM_001014765:478 NM_183...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FBX30= | ||
| + | |FBX6A= | ||
| + | |Fbx44= | ||
| + | |Fbxo6a= | ||
|all_trans=ENST00000251546.8:0 NM_183412:0 NM_001304791:0 uc001ask.4:0 AK055344:0 ENST00000425796.5:478 ENST00000376770.5:478 NM_033182:478 NM_001014765:478 NM_183413:478 NM_001304790:478 NR_130909:478 uc057cgl.1:478 uc001asl.3:478 CR749368:490 AK296025:498 AK301418:498 AK316284:498 | |all_trans=ENST00000251546.8:0 NM_183412:0 NM_001304791:0 uc001ask.4:0 AK055344:0 ENST00000425796.5:478 ENST00000376770.5:478 NM_033182:478 NM_001014765:478 NM_183413:478 NM_001304790:478 NR_130909:478 uc057cgl.1:478 uc001asl.3:478 CR749368:490 AK296025:498 AK301418:498 AK316284:498 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=11654379 | |end=11654379 | ||
| + | |end_of_center_position=11654374 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=FBG3 | + | |gene_alias=FBG3 |
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
|gene_id=93611 | |gene_id=93611 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=11654368 | |start=11654368 | ||
| + | |start_of_center_position=11654373 | ||
|strand=+ | |strand=+ | ||
|tata_box="76(GCCTCTTAAAGG,-,0.00),77(CCTCTTAAAGGC,+,0.00),78(CTCTTAAAGGCC,+,0.00)" | |tata_box="76(GCCTCTTAAAGG,-,0.00),77(CCTCTTAAAGGC,+,0.00),78(CTCTTAAAGGCC,+,0.00)" | ||
Revision as of 17:28, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11654373 |
|---|---|
| End of the center position in the TSS region: | 11654374 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000251546.8 NM_183412 NM_001304791 uc001ask.4 AK055344 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000251546.8:0 NM_183412:0 NM_001304791:0 uc001ask.4:0 AK055344:0 ENST00000425796.5:478 ENST00000376770.5:478 NM_033182:478 NM_001014765:478 NM_183413:478 NM_001304790:478 NR_130909:478 uc057cgl.1:478 uc001asl.3:478 CR749368:490 AK296025:498 AK301418:498 AK316284:498 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_183412 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 44 |
| Gene Alias: | FBG3 |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "76(GCCTCTTAAAGG,-,0.00),77(CCTCTTAAAGGC,+,0.00),78(CTCTTAAAGGCC,+,0.00)" |
