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Difference between revisions of "TSS:Hg 10574.1"

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Line 12: Line 12:
 
|distance_to_tss=-21179
 
|distance_to_tss=-21179
 
|end=17075354
 
|end=17075354
 +
|end_of_center_position=17075350
 
|entrez_id=6390
 
|entrez_id=6390
 
|gc_percent=0.378109
 
|gc_percent=0.378109
|gene_alias=CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP
+
|gene_alias=CWS2
 
|gene_description=succinate dehydrogenase complex iron sulfur subunit B
 
|gene_description=succinate dehydrogenase complex iron sulfur subunit B
 
|gene_id=11240
 
|gene_id=11240
Line 30: Line 31:
 
|species=human
 
|species=human
 
|start=17075344
 
|start=17075344
 +
|start_of_center_position=17075349
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000479534.5 uc057ctx.1 AK123164
 
|transcript_name=ENST00000479534.5 uc057ctx.1 AK123164

Revision as of 18:34, 10 May 2019

Basic information about the TSS


TSS ID:hg_10574.1
Species:human
Chr:chr1
TSS Classification:no
Start:17075344
End:17075354
Strand:-
TSS Score:1
Start of the center position in the TSS region:17075349
End of the center position in the TSS region:17075350



Gene and protein annotation


Transcript_name:ENST00000479534.5 uc057ctx.1 AK123164
Distance:0
GeneID:11240
HGNC/MGI_ID:HGNC:18341
UniProt_ID:Q6ZWF8
Gene_name:"peptidyl arginine deiminase, type II"
Gene_symbol:PADI2
Gene_synonyms:KIAA0994 PDI2
Gene_source:HGNC:18341



Transcript annotation


Transcript_name:ENST00000479534.5 uc057ctx.1 AK123164
Distance:0
Num_trans:3
All_trans:ENST00000479534.5:0 uc057ctx.1:0 AK123164:0



TATA-Box annotation


Distance to TSS:-21179
Nearest PromoterID:NM_003000
Entrez ID:6390
Nearest Unigene:Hs.465924
Nearest Refseq:NM_003000
Nearest Ensembl:ENSG00000117118
Gene Name:"peptidyl arginine deiminase, type II"
Gene Alias:CWS2
Gene Description:succinate dehydrogenase complex iron sulfur subunit B
Gene Type:protein-coding
CpG%:0
GC%:0.378109
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):