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Difference between revisions of "TSS:Hg 10647.1"

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Line 6: Line 6:
 
|distance_to_tss=73
 
|distance_to_tss=73
 
|end=19210478
 
|end=19210478
 +
|end_of_center_position=19210459
 
|entrez_id=101927895
 
|entrez_id=101927895
 
|gc_percent=0.651741
 
|gc_percent=0.651741
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=19210439
 
|start=19210439
 +
|start_of_center_position=19210458
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000375254.7 uc001bbi.4
 
|transcript_name=ENST00000375254.7 uc001bbi.4

Revision as of 18:50, 10 May 2019

Basic information about the TSS


TSS ID:hg_10647.1
Species:human
Chr:chr1
TSS Classification:yes
Start:19210439
End:19210478
Strand:-
TSS Score:1
Start of the center position in the TSS region:19210458
End of the center position in the TSS region:19210459



Gene and protein annotation


Transcript_name:ENST00000375254.7 uc001bbi.4
Distance:164
GeneID:23352
HGNC/MGI_ID:HGNC:30313
UniProt_ID:Q5T4S7
Gene_name:ubiquitin protein ligase E3 component n-recognin 4
Gene_symbol:UBR4
Gene_synonyms:KIAA0462 KIAA1307 RBAF600
Gene_source:HGNC:30313



Transcript annotation


Transcript_name:ENST00000375254.7 uc001bbi.4
Distance:164
Num_trans:5
All_trans:ENST00000375254.7:164 uc001bbi.4:164 BC041137:184 NM_020765:188 AF348492:192



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NR_135115
Entrez ID:101927895
Nearest Unigene:Hs.660534
Nearest Refseq:NR_135114
Nearest Ensembl:ENSG00000230424
Gene Name:ubiquitin protein ligase E3 component n-recognin 4
Gene Alias:-
Gene Description:uncharacterized LOC101927895
Gene Type:ncRNA
CpG%:0.12
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):