Difference between revisions of "TSS:Mm 6398.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc029qpa.1:113 BC039231:113 |chr=chr1 |cpg_percent=0.025 |distance=113 |distance_to_tss=13357 |end=72861519 |entrez_id=16011 |gc_percent=0.462687 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW208790= | ||
| + | |IGFBP-5= | ||
| + | |IGFBP-5P= | ||
|all_trans=uc029qpa.1:113 BC039231:113 | |all_trans=uc029qpa.1:113 BC039231:113 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=13357 | |distance_to_tss=13357 | ||
|end=72861519 | |end=72861519 | ||
| + | |end_of_center_position=72861508 | ||
|entrez_id=16011 | |entrez_id=16011 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=AI256729 | + | |gene_alias=AI256729 |
|gene_description=insulin-like growth factor binding protein 5 | |gene_description=insulin-like growth factor binding protein 5 | ||
|gene_id=16011 | |gene_id=16011 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=72861496 | |start=72861496 | ||
| + | |start_of_center_position=72861507 | ||
|strand=- | |strand=- | ||
|tata_box="24(GACTTTATAGGC,-,0.00)" | |tata_box="24(GACTTTATAGGC,-,0.00)" | ||
Revision as of 20:02, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72861507 |
|---|---|
| End of the center position in the TSS region: | 72861508 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc029qpa.1 BC039231 |
|---|---|
| Distance: | 113 |
| Num_trans: | 2 |
| All_trans: | uc029qpa.1:113 BC039231:113 |
TATA-Box annotation
| Distance to TSS: | 13357 |
|---|---|
| Nearest PromoterID: | NM_010518 |
| Entrez ID: | 16011 |
| Nearest Unigene: | Mm.405761 |
| Nearest Refseq: | NM_010518 |
| Nearest Ensembl: | ENSMUSG00000026185 |
| Gene Name: | insulin-like growth factor binding protein 5 |
| Gene Alias: | AI256729 |
| Gene Description: | insulin-like growth factor binding protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "24(GACTTTATAGGC,-,0.00)" |
