Difference between revisions of "TSS:Hg 180967.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000537834.5:-41 uc010xvk.2:-41 AK304209:-41 ENST00000498350.1:42 uc060yqv.1:42 ENST00000416994.6:-350 uc060yqt.1:-350 |chr=chr19 |cpg_percent=0.03...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=3364 | |distance_to_tss=3364 | ||
|end=40279289 | |end=40279289 | ||
| + | |end_of_center_position=40279278 | ||
|entrez_id=693226 | |entrez_id=693226 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=MIRN641 | + | |gene_alias=MIRN641 |
|gene_description=microRNA 641 | |gene_description=microRNA 641 | ||
|gene_id=208 | |gene_id=208 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:392 | |hgnc_mgi_id=HGNC:392 | ||
| + | |hsa-mir-641= | ||
| + | |mir-641= | ||
|nearest_ensembl=ENSG00000207631 | |nearest_ensembl=ENSG00000207631 | ||
|nearest_promoter_id=NR_030371 | |nearest_promoter_id=NR_030371 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=40279265 | |start=40279265 | ||
| + | |start_of_center_position=40279277 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000537834.5 uc010xvk.2 AK304209 | |transcript_name=ENST00000537834.5 uc010xvk.2 AK304209 | ||
Revision as of 22:16, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 40279277 |
|---|---|
| End of the center position in the TSS region: | 40279278 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000537834.5 uc010xvk.2 AK304209 |
|---|---|
| Distance: | -41 |
| Num_trans: | 7 |
| All_trans: | ENST00000537834.5:-41 uc010xvk.2:-41 AK304209:-41 ENST00000498350.1:42 uc060yqv.1:42 ENST00000416994.6:-350 uc060yqt.1:-350 |
TATA-Box annotation
| Distance to TSS: | 3364 |
|---|---|
| Nearest PromoterID: | NR_030371 |
| Entrez ID: | 693226 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030371 |
| Nearest Ensembl: | ENSG00000207631 |
| Gene Name: | v-akt murine thymoma viral oncogene homolog 2 |
| Gene Alias: | MIRN641 |
| Gene Description: | microRNA 641 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
