Difference between revisions of "TSS:Hg 11861.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=360 | |distance_to_tss=360 | ||
|end=39576557 | |end=39576557 | ||
| + | |end_of_center_position=39576490 | ||
|entrez_id=8761 | |entrez_id=8761 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=APP-1 | + | |gene_alias=APP-1 |
|gene_description=poly(A) binding protein cytoplasmic 4 | |gene_description=poly(A) binding protein cytoplasmic 4 | ||
|gene_id=8761 | |gene_id=8761 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=39576421 | |start=39576421 | ||
| + | |start_of_center_position=39576489 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000372858.7 uc001cdl.3 BC029969 | |transcript_name=ENST00000372858.7 uc001cdl.3 BC029969 | ||
Revision as of 22:57, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 39576489 |
|---|---|
| End of the center position in the TSS region: | 39576490 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372858.7 uc001cdl.3 BC029969 |
|---|---|
| Distance: | 21 |
| Num_trans: | 21 |
| All_trans: | ENST00000372858.7:21 uc001cdl.3:21 BC029969:21 ENST00000372862.7:169 uc057fbl.1:169 ENST00000372857.7:-187 uc010oiv.2:-187 U75686:-187 ENST00000372856.7:-194 uc001cdm.3:-194 BC065540:-194 BC071591:-228 ENST00000531243.2:-230 uc057fcd.1:-230 ENST00000451091.2:-233 uc057fcc.1:-233 BC094755:-233 NM_001135654:-292 NM_001135653:-292 NM_003819:-292 U33818:435 |
TATA-Box annotation
| Distance to TSS: | 360 |
|---|---|
| Nearest PromoterID: | NM_001135654 |
| Entrez ID: | 8761 |
| Nearest Unigene: | Hs.169900 |
| Nearest Refseq: | NM_003819 |
| Nearest Ensembl: | ENSG00000090621 |
| Gene Name: | "poly(A) binding protein, cytoplasmic 4 (inducible form)" |
| Gene Alias: | APP-1 |
| Gene Description: | poly(A) binding protein cytoplasmic 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
