Difference between revisions of "TSS:Hg 11866.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-45 | |distance_to_tss=-45 | ||
|end=39576896 | |end=39576896 | ||
| + | |end_of_center_position=39576895 | ||
|entrez_id=8761 | |entrez_id=8761 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=APP-1 | + | |gene_alias=APP-1 |
|gene_description=poly(A) binding protein cytoplasmic 4 | |gene_description=poly(A) binding protein cytoplasmic 4 | ||
|gene_id=8761 | |gene_id=8761 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=39576892 | |start=39576892 | ||
| + | |start_of_center_position=39576894 | ||
|strand=- | |strand=- | ||
|tata_box="71(GGGTATAAATGG,-,0.00)" | |tata_box="71(GGGTATAAATGG,-,0.00)" | ||
Revision as of 22:57, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 39576894 |
|---|---|
| End of the center position in the TSS region: | 39576895 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001135654 NM_001135653 NM_003819 |
|---|---|
| Distance: | 44 |
| Num_trans: | 18 |
| All_trans: | NM_001135654:44 NM_001135653:44 NM_003819:44 ENST00000451091.2:103 uc057fcc.1:103 BC094755:103 ENST00000531243.2:106 uc057fcd.1:106 BC071591:108 ENST00000372856.7:142 uc001cdm.3:142 BC065540:142 ENST00000372857.7:149 uc010oiv.2:149 U75686:149 ENST00000372858.7:492 uc001cdl.3:492 BC029969:492 |
TATA-Box annotation
| Distance to TSS: | -45 |
|---|---|
| Nearest PromoterID: | NM_003819 |
| Entrez ID: | 8761 |
| Nearest Unigene: | Hs.169900 |
| Nearest Refseq: | NM_003819 |
| Nearest Ensembl: | ENSG00000090621 |
| Gene Name: | "poly(A) binding protein, cytoplasmic 4 (inducible form)" |
| Gene Alias: | APP-1 |
| Gene Description: | poly(A) binding protein cytoplasmic 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "71(GGGTATAAATGG,-,0.00)" |
