Difference between revisions of "TSS:Hg 11867.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-58 | |distance_to_tss=-58 | ||
|end=39576910 | |end=39576910 | ||
| + | |end_of_center_position=39576907 | ||
|entrez_id=8761 | |entrez_id=8761 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=APP-1 | + | |gene_alias=APP-1 |
|gene_description=poly(A) binding protein cytoplasmic 4 | |gene_description=poly(A) binding protein cytoplasmic 4 | ||
|gene_id=8761 | |gene_id=8761 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=39576903 | |start=39576903 | ||
| + | |start_of_center_position=39576906 | ||
|strand=- | |strand=- | ||
|tata_box="84(GGGTATAAATGG,-,0.00)" | |tata_box="84(GGGTATAAATGG,-,0.00)" | ||
Revision as of 22:57, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 39576906 |
|---|---|
| End of the center position in the TSS region: | 39576907 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001135654 NM_001135653 NM_003819 |
|---|---|
| Distance: | 55 |
| Num_trans: | 15 |
| All_trans: | NM_001135654:55 NM_001135653:55 NM_003819:55 ENST00000451091.2:114 uc057fcc.1:114 BC094755:114 ENST00000531243.2:117 uc057fcd.1:117 BC071591:119 ENST00000372856.7:153 uc001cdm.3:153 BC065540:153 ENST00000372857.7:160 uc010oiv.2:160 U75686:160 |
TATA-Box annotation
| Distance to TSS: | -58 |
|---|---|
| Nearest PromoterID: | NM_003819 |
| Entrez ID: | 8761 |
| Nearest Unigene: | Hs.169900 |
| Nearest Refseq: | NM_003819 |
| Nearest Ensembl: | ENSG00000090621 |
| Gene Name: | "poly(A) binding protein, cytoplasmic 4 (inducible form)" |
| Gene Alias: | APP-1 |
| Gene Description: | poly(A) binding protein cytoplasmic 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "84(GGGTATAAATGG,-,0.00)" |
