Personal tools

Difference between revisions of "TSS:Hg 181879.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000549533.1:-218 uc061auj.1:-218 |chr=chr19 |cpg_percent=0.045 |distance=-218 |distance_to_tss=-2752 |end=48616207 |entrez_id=54854 |gc_percent=0....")
 
Line 6: Line 6:
 
|distance_to_tss=-2752
 
|distance_to_tss=-2752
 
|end=48616207
 
|end=48616207
 +
|end_of_center_position=48616189
 
|entrez_id=54854
 
|entrez_id=54854
 
|gc_percent=0.676617
 
|gc_percent=0.676617
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=48616170
 
|start=48616170
 +
|start_of_center_position=48616188
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000549533.1 uc061auj.1
 
|transcript_name=ENST00000549533.1 uc061auj.1

Revision as of 01:15, 11 May 2019

Basic information about the TSS


TSS ID:hg_181879.1
Species:human
Chr:chr19
TSS Classification:no
Start:48616170
End:48616207
Strand:-
TSS Score:1
Start of the center position in the TSS region:48616188
End of the center position in the TSS region:48616189



Gene and protein annotation


Transcript_name:ENST00000549533.1 uc061auj.1
Distance:-218
GeneID:6141
HGNC/MGI_ID:HGNC:10310
UniProt_ID:
Gene_name:ribosomal protein L18
Gene_symbol:RPL18
Gene_synonyms:L18
Gene_source:HGNC:10310



Transcript annotation


Transcript_name:ENST00000549533.1 uc061auj.1
Distance:-218
Num_trans:2
All_trans:ENST00000549533.1:-218 uc061auj.1:-218



TATA-Box annotation


Distance to TSS:-2752
Nearest PromoterID:NM_017708
Entrez ID:54854
Nearest Unigene:Hs.165803
Nearest Refseq:NM_017708
Nearest Ensembl:ENSG00000105523
Gene Name:ribosomal protein L18
Gene Alias:-
Gene Description:family with sequence similarity 83 member E
Gene Type:protein-coding
CpG%:0.045
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):