Difference between revisions of "TSS:Hg 237646.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC019609:-1 BC015218:-2 ENST00000626009.1:-3 uc060ynt.1:-3 ENST00000595545.5:72 uc060ynj.1:72 ENST00000597224.5:-209 uc060ynm.1:-209 KJ891122:-277 BT006...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FLRN= | ||
| + | |RNU3IP1= | ||
|all_trans=BC019609:-1 BC015218:-2 ENST00000626009.1:-3 uc060ynt.1:-3 ENST00000595545.5:72 uc060ynj.1:72 ENST00000597224.5:-209 uc060ynm.1:-209 KJ891122:-277 BT006830:-277 BT020144:-277 DQ892314:-277 DQ895517:-277 AB451384:-277 CR457069:-277 | |all_trans=BC019609:-1 BC015218:-2 ENST00000626009.1:-3 uc060ynt.1:-3 ENST00000595545.5:72 uc060ynj.1:72 ENST00000597224.5:-209 uc060ynm.1:-209 KJ891122:-277 BT006830:-277 BT020144:-277 DQ892314:-277 DQ895517:-277 AB451384:-277 CR457069:-277 | ||
|chr=chr19 | |chr=chr19 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=5901 | |distance_to_tss=5901 | ||
|end=39840513 | |end=39840513 | ||
| + | |end_of_center_position=48619295 | ||
|entrez_id=2091 | |entrez_id=2091 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=FIB | + | |gene_alias=FIB |
|gene_description=fibrillarin | |gene_description=fibrillarin | ||
|gene_id=2091 | |gene_id=2091 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=39840512 | |start=39840512 | ||
| + | |start_of_center_position=48619294 | ||
|strand=- | |strand=- | ||
|tata_box="-12(TCCTTTATAGGT,+,0.00)" | |tata_box="-12(TCCTTTATAGGT,+,0.00)" | ||
Revision as of 01:16, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 48619294 |
|---|---|
| End of the center position in the TSS region: | 48619295 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC019609 |
|---|---|
| Distance: | -1 |
| Num_trans: | 15 |
| All_trans: | BC019609:-1 BC015218:-2 ENST00000626009.1:-3 uc060ynt.1:-3 ENST00000595545.5:72 uc060ynj.1:72 ENST00000597224.5:-209 uc060ynm.1:-209 KJ891122:-277 BT006830:-277 BT020144:-277 DQ892314:-277 DQ895517:-277 AB451384:-277 CR457069:-277 |
TATA-Box annotation
| Distance to TSS: | 5901 |
|---|---|
| Nearest PromoterID: | NM_001436 |
| Entrez ID: | 2091 |
| Nearest Unigene: | Hs.299002 |
| Nearest Refseq: | NM_001436 |
| Nearest Ensembl: | ENSG00000105202 |
| Gene Name: | fibrillarin |
| Gene Alias: | FIB |
| Gene Description: | fibrillarin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-12(TCCTTTATAGGT,+,0.00)" |
