Difference between revisions of "TSS:Hg 3073.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000407417.7:26 NM_001145511:26 uc001czy.4:26 AK299289:26 AK092769:-101 |chr=chr1 |cpg_percent=0.07 |distance=26 |distance_to_tss=-40 |end=61077248...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NF-I/A= | ||
| + | |NF1-A= | ||
| + | |NFI-A= | ||
| + | |NFI-L= | ||
|all_trans=ENST00000407417.7:26 NM_001145511:26 uc001czy.4:26 AK299289:26 AK092769:-101 | |all_trans=ENST00000407417.7:26 NM_001145511:26 uc001czy.4:26 AK299289:26 AK092769:-101 | ||
|chr=chr1 | |chr=chr1 | ||
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|distance_to_tss=-40 | |distance_to_tss=-40 | ||
|end=61077248 | |end=61077248 | ||
| + | |end_of_center_position=61077234 | ||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=CTF | + | |gene_alias=CTF |
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_id=4774 | |gene_id=4774 | ||
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|species=human | |species=human | ||
|start=61077219 | |start=61077219 | ||
| + | |start_of_center_position=61077233 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000407417.7 NM_001145511 uc001czy.4 AK299289 | |transcript_name=ENST00000407417.7 NM_001145511 uc001czy.4 AK299289 | ||
Revision as of 01:31, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 61077233 |
|---|---|
| End of the center position in the TSS region: | 61077234 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000407417.7 NM_001145511 uc001czy.4 AK299289 |
|---|---|
| Distance: | 26 |
| Num_trans: | 5 |
| All_trans: | ENST00000407417.7:26 NM_001145511:26 uc001czy.4:26 AK299289:26 AK092769:-101 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_001145511 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | nuclear factor I/A |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
