Difference between revisions of "TSS:Hg 3726.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000370715.5:-194 ENST00000370713.5:-194 ENST00000319517.10:-194 ENST00000627151.2:-194 ENST00000370717.6:-194 NM_012302:-194 NM_001297705:-194 NM_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CL2= | ||
| + | |LEC1= | ||
| + | |LPHH1= | ||
| + | |LPHN2= | ||
|all_trans=ENST00000370715.5:-194 ENST00000370713.5:-194 ENST00000319517.10:-194 ENST00000627151.2:-194 ENST00000370717.6:-194 NM_012302:-194 NM_001297705:-194 NM_001297706:-194 uc001diu.4:-194 uc009wcd.4:-194 uc001div.4:-194 uc057hxh.1:-194 uc057hxi.1:-194 AF104266:-194 AF104938:-194 AF104939:-194 | |all_trans=ENST00000370715.5:-194 ENST00000370713.5:-194 ENST00000319517.10:-194 ENST00000627151.2:-194 ENST00000370717.6:-194 NM_012302:-194 NM_001297705:-194 NM_001297706:-194 uc001diu.4:-194 uc009wcd.4:-194 uc001div.4:-194 uc057hxh.1:-194 uc057hxi.1:-194 AF104266:-194 AF104938:-194 AF104939:-194 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=211 | |distance_to_tss=211 | ||
|end=81800625 | |end=81800625 | ||
| + | |end_of_center_position=81800608 | ||
|entrez_id=23266 | |entrez_id=23266 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CIRL2 | + | |gene_alias=CIRL2 |
|gene_description=adhesion G protein-coupled receptor L2 | |gene_description=adhesion G protein-coupled receptor L2 | ||
|gene_id=23266 | |gene_id=23266 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=81800590 | |start=81800590 | ||
| + | |start_of_center_position=81800607 | ||
|strand=+ | |strand=+ | ||
|tata_box="81(GTTTTTAAAGTG,+,0.00)" | |tata_box="81(GTTTTTAAAGTG,+,0.00)" | ||
Revision as of 03:09, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 81800607 |
|---|---|
| End of the center position in the TSS region: | 81800608 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370715.5 ENST00000370713.5 ENST00000319517.10 ENST00000627151.2 ENST00000370717.6 NM_012302 NM_001297705 NM_001297706 uc001diu.4 uc009wcd.4 uc001div.4 uc057hxh.1 uc057hxi.1 AF104266 AF104938 AF104939 |
|---|---|
| Distance: | -194 |
| Num_trans: | 16 |
| All_trans: | ENST00000370715.5:-194 ENST00000370713.5:-194 ENST00000319517.10:-194 ENST00000627151.2:-194 ENST00000370717.6:-194 NM_012302:-194 NM_001297705:-194 NM_001297706:-194 uc001diu.4:-194 uc009wcd.4:-194 uc001div.4:-194 uc057hxh.1:-194 uc057hxi.1:-194 AF104266:-194 AF104938:-194 AF104939:-194 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_012302 |
| Entrez ID: | 23266 |
| Nearest Unigene: | Hs.24212 |
| Nearest Refseq: | NM_012302 |
| Nearest Ensembl: | ENSG00000117114 |
| Gene Name: | adhesion G protein-coupled receptor L2 |
| Gene Alias: | CIRL2 |
| Gene Description: | adhesion G protein-coupled receptor L2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "81(GTTTTTAAAGTG,+,0.00)" |
