Difference between revisions of "TSS:Hg 238423.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ABETA= | ||
| + | |ABPP= | ||
| + | |AD1= | ||
| + | |APPI= | ||
| + | |CTFgamma= | ||
| + | |CVAP= | ||
| + | |PN-II= | ||
| + | |PN2= | ||
|all_trans=ENST00000357903.7:9 uc002yma.4:9 NM_000484:-22 NM_001136130:-22 NM_001204302:-22 NM_001204303:-22 NM_001204301:-22 NM_201414:-22 NM_201413:-22 NM_001136129:-22 M35675:26 ENST00000348990.9:29 uc002ymb.4:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 BC065529:45 BC065523:45 ENST00000354192.7:49 uc010glj.4:49 AF282245:49 ENST00000474136.5:50 uc061zhv.1:50 BC004369:50 X06989:58 AK297229:112 AK312326:112 ENST00000358918.7:129 uc021whz.2:129 ENST00000346798.7:142 ENST00000439274.6:142 uc002ylz.4:142 uc011ach.3:142 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 ENST00000359726.7:-330 NM_001136131:-330 uc011aci.3:-330 AK296229:-330 | |all_trans=ENST00000357903.7:9 uc002yma.4:9 NM_000484:-22 NM_001136130:-22 NM_001204302:-22 NM_001204303:-22 NM_001204301:-22 NM_201414:-22 NM_201413:-22 NM_001136129:-22 M35675:26 ENST00000348990.9:29 uc002ymb.4:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 BC065529:45 BC065523:45 ENST00000354192.7:49 uc010glj.4:49 AF282245:49 ENST00000474136.5:50 uc061zhv.1:50 BC004369:50 X06989:58 AK297229:112 AK312326:112 ENST00000358918.7:129 uc021whz.2:129 ENST00000346798.7:142 ENST00000439274.6:142 uc002ylz.4:142 uc011ach.3:142 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 ENST00000359726.7:-330 NM_001136131:-330 uc011aci.3:-330 AK296229:-330 | ||
|chr=chr21 | |chr=chr21 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=26170798 | |end=26170798 | ||
| + | |end_of_center_position=1484629 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=AAA | + | |gene_alias=AAA |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_id=351 | |gene_id=351 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=26170795 | |start=26170795 | ||
| + | |start_of_center_position=1484628 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000357903.7 uc002yma.4 | |transcript_name=ENST00000357903.7 uc002yma.4 | ||
Revision as of 05:01, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1484628 |
|---|---|
| End of the center position in the TSS region: | 1484629 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000357903.7 uc002yma.4 |
|---|---|
| Distance: | 9 |
| Num_trans: | 42 |
| All_trans: | ENST00000357903.7:9 uc002yma.4:9 NM_000484:-22 NM_001136130:-22 NM_001204302:-22 NM_001204303:-22 NM_001204301:-22 NM_201414:-22 NM_201413:-22 NM_001136129:-22 M35675:26 ENST00000348990.9:29 uc002ymb.4:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 BC065529:45 BC065523:45 ENST00000354192.7:49 uc010glj.4:49 AF282245:49 ENST00000474136.5:50 uc061zhv.1:50 BC004369:50 X06989:58 AK297229:112 AK312326:112 ENST00000358918.7:129 uc021whz.2:129 ENST00000346798.7:142 ENST00000439274.6:142 uc002ylz.4:142 uc011ach.3:142 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 ENST00000359726.7:-330 NM_001136131:-330 uc011aci.3:-330 AK296229:-330 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_000484 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | AAA |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
