Difference between revisions of "TSS:Hg 100598.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=381 | |distance_to_tss=381 | ||
|end=35650573 | |end=35650573 | ||
| + | |end_of_center_position=35650569 | ||
|entrez_id=27240 | |entrez_id=27240 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=SIT | + | |gene_alias=SIT |
|gene_description=signaling threshold regulating transmembrane adaptor 1 | |gene_description=signaling threshold regulating transmembrane adaptor 1 | ||
|gene_id=27240 | |gene_id=27240 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=35650564 | |start=35650564 | ||
| + | |start_of_center_position=35650568 | ||
|strand=- | |strand=- | ||
|tata_box="-31(CCTCTTAGGGGC,+,0.00)" | |tata_box="-31(CCTCTTAGGGGC,+,0.00)" | ||
Revision as of 06:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 35650568 |
|---|---|
| End of the center position in the TSS region: | 35650569 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000486859.5 uc064sxp.1 |
|---|---|
| Distance: | 95 |
| Num_trans: | 17 |
| All_trans: | ENST00000486859.5:95 uc064sxp.1:95 AK093793:-130 AB527705:-283 ENST00000474403.1:-337 uc064sxq.1:-337 AK314758:-358 ENST00000259608.7:-367 uc003zxe.3:-367 AJ010059:-367 JQ924063:-367 BC102029:-375 BC104491:-375 BC107484:-375 ENST00000618781.1:-377 NM_014450:-377 uc064sxo.1:-377 |
TATA-Box annotation
| Distance to TSS: | 381 |
|---|---|
| Nearest PromoterID: | NM_014450 |
| Entrez ID: | 27240 |
| Nearest Unigene: | Hs.88012 |
| Nearest Refseq: | NM_014450 |
| Nearest Ensembl: | ENSG00000137078 |
| Gene Name: | signaling threshold regulating transmembrane adaptor 1 |
| Gene Alias: | SIT |
| Gene Description: | signaling threshold regulating transmembrane adaptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-31(CCTCTTAGGGGC,+,0.00)" |
