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Difference between revisions of "TSS:Hg 100762.1"

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Line 6: Line 6:
 
|distance_to_tss=764
 
|distance_to_tss=764
 
|end=38068458
 
|end=38068458
 +
|end_of_center_position=38068450
 
|entrez_id=6461
 
|entrez_id=6461
 
|gc_percent=0.736318
 
|gc_percent=0.736318
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=38068440
 
|start=38068440
 +
|start_of_center_position=38068449
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000540557.1 uc064tcy.1
 
|transcript_name=ENST00000540557.1 uc064tcy.1

Revision as of 07:07, 11 May 2019

Basic information about the TSS


TSS ID:hg_100762.1
Species:human
Chr:chr9
TSS Classification:yes
Start:38068440
End:38068458
Strand:-
TSS Score:1
Start of the center position in the TSS region:38068449
End of the center position in the TSS region:38068450



Gene and protein annotation


Transcript_name:ENST00000540557.1 uc064tcy.1
Distance:-229
GeneID:6461
HGNC/MGI_ID:HGNC:10838
UniProt_ID:
Gene_name:Src homology 2 domain containing adaptor protein B
Gene_symbol:SHB
Gene_synonyms:
Gene_source:HGNC:10838



Transcript annotation


Transcript_name:ENST00000540557.1 uc064tcy.1
Distance:-229
Num_trans:3
All_trans:ENST00000540557.1:-229 uc064tcy.1:-229 BC029953:-260



TATA-Box annotation


Distance to TSS:764
Nearest PromoterID:NM_003028
Entrez ID:6461
Nearest Unigene:Hs.521482
Nearest Refseq:NM_003028
Nearest Ensembl:ENSG00000107338
Gene Name:Src homology 2 domain containing adaptor protein B
Gene Alias:bA3J10.2
Gene Description:SH2 domain containing adaptor protein B
Gene Type:protein-coding
CpG%:0.135
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):