Difference between revisions of "TSS:Mm 9923.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000165663.1:10 AK080758:-13 ENSMUST00000171929.7:-27 ENSMUST00000165962.1:-27 ENSMUST00000194165.1:-27 NM_001081363:-27 uc007eao.2:-27 uc007eaq...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI325968= | ||
| + | |CENF= | ||
| + | |Lek1= | ||
| + | |PRO1779= | ||
|all_trans=ENSMUST00000165663.1:10 AK080758:-13 ENSMUST00000171929.7:-27 ENSMUST00000165962.1:-27 ENSMUST00000194165.1:-27 NM_001081363:-27 uc007eao.2:-27 uc007eaq.1:-27 AK029517:-27 AK165236:-27 AK143730:-27 | |all_trans=ENSMUST00000165663.1:10 AK080758:-13 ENSMUST00000171929.7:-27 ENSMUST00000165962.1:-27 ENSMUST00000194165.1:-27 NM_001081363:-27 uc007eao.2:-27 uc007eaq.1:-27 AK029517:-27 AK165236:-27 AK143730:-27 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
|end=189688059 | |end=189688059 | ||
| + | |end_of_center_position=189688052 | ||
|entrez_id=108000 | |entrez_id=108000 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=6530404A22Rik | + | |gene_alias=6530404A22Rik |
|gene_description=centromere protein F | |gene_description=centromere protein F | ||
|gene_id=108000 | |gene_id=108000 | ||
| Line 17: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1313302 | |hgnc_mgi_id=MGI:1313302 | ||
| + | |mitosin= | ||
|nearest_ensembl=ENSMUSG00000026605 | |nearest_ensembl=ENSMUSG00000026605 | ||
|nearest_promoter_id=NM_001081363 | |nearest_promoter_id=NM_001081363 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=189688044 | |start=189688044 | ||
| + | |start_of_center_position=189688051 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000165663.1 | |transcript_name=ENSMUST00000165663.1 | ||
Revision as of 07:09, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 189688051 |
|---|---|
| End of the center position in the TSS region: | 189688052 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000165663.1 |
|---|---|
| Distance: | 10 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000165663.1:10 AK080758:-13 ENSMUST00000171929.7:-27 ENSMUST00000165962.1:-27 ENSMUST00000194165.1:-27 NM_001081363:-27 uc007eao.2:-27 uc007eaq.1:-27 AK029517:-27 AK165236:-27 AK143730:-27 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_001081363 |
| Entrez ID: | 108000 |
| Nearest Unigene: | Mm.129746 |
| Nearest Refseq: | NM_001081363 |
| Nearest Ensembl: | ENSMUSG00000026605 |
| Gene Name: | centromere protein F |
| Gene Alias: | 6530404A22Rik |
| Gene Description: | centromere protein F |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
