Difference between revisions of "TSS:Mm 9940.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000175916.7:0 ENSMUST00000177288.3:0 NM_008937:0 uc033fol.1:0 BC051411:0 AK052889:0 |chr=chr1 |cpg_percent=0.085 |distance=0 |distance_to_tss=-...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
|end=190170744 | |end=190170744 | ||
| + | |end_of_center_position=190170708 | ||
|entrez_id=19130 | |entrez_id=19130 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=190170671 | |start=190170671 | ||
| + | |start_of_center_position=190170707 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000175916.7 ENSMUST00000177288.3 NM_008937 uc033fol.1 BC051411 AK052889 | |transcript_name=ENSMUST00000175916.7 ENSMUST00000177288.3 NM_008937 uc033fol.1 BC051411 AK052889 | ||
Revision as of 07:12, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 190170707 |
|---|---|
| End of the center position in the TSS region: | 190170708 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000175916.7 ENSMUST00000177288.3 NM_008937 uc033fol.1 BC051411 AK052889 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000175916.7:0 ENSMUST00000177288.3:0 NM_008937:0 uc033fol.1:0 BC051411:0 AK052889:0 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_008937 |
| Entrez ID: | 19130 |
| Nearest Unigene: | Mm.132579 |
| Nearest Refseq: | NM_008937 |
| Nearest Ensembl: | ENSMUSG00000010175 |
| Gene Name: | prospero homeobox 1 |
| Gene Alias: | A230003G05Rik |
| Gene Description: | prospero homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
