Difference between revisions of "TSS:Mm 9941.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000175916.7:108 AK052889:110 ENSMUST00000177288.3:142 NM_008937:142 uc033fol.1:142 BC051411:142 |chr=chr1 |cpg_percent=0.055 |distance=108 |dis...") |
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|distance_to_tss=-147 | |distance_to_tss=-147 | ||
|end=190170832 | |end=190170832 | ||
| + | |end_of_center_position=190170827 | ||
|entrez_id=19130 | |entrez_id=19130 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=190170821 | |start=190170821 | ||
| + | |start_of_center_position=190170826 | ||
|strand=- | |strand=- | ||
|tata_box="-37(CCTTTTATATAT,+,0.00)" | |tata_box="-37(CCTTTTATATAT,+,0.00)" | ||
Revision as of 07:12, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 190170826 |
|---|---|
| End of the center position in the TSS region: | 190170827 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000175916.7 |
|---|---|
| Distance: | 108 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000175916.7:108 AK052889:110 ENSMUST00000177288.3:142 NM_008937:142 uc033fol.1:142 BC051411:142 |
TATA-Box annotation
| Distance to TSS: | -147 |
|---|---|
| Nearest PromoterID: | NM_008937 |
| Entrez ID: | 19130 |
| Nearest Unigene: | Mm.132579 |
| Nearest Refseq: | NM_008937 |
| Nearest Ensembl: | ENSMUSG00000010175 |
| Gene Name: | prospero homeobox 1 |
| Gene Alias: | A230003G05Rik |
| Gene Description: | prospero homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(CCTTTTATATAT,+,0.00)" |
