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Difference between revisions of "TSS:Hg 101024.1"

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Line 6: Line 6:
 
|distance_to_tss=22
 
|distance_to_tss=22
 
|end=74952901
 
|end=74952901
 +
|end_of_center_position=74952865
 
|entrez_id=55071
 
|entrez_id=55071
 
|gc_percent=0.746269
 
|gc_percent=0.746269
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=74952827
 
|start=74952827
 +
|start_of_center_position=74952864
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000376854.5 NM_017998 uc004ajo.5 AK000972 AK225349
 
|transcript_name=ENST00000376854.5 NM_017998 uc004ajo.5 AK000972 AK225349

Revision as of 07:59, 11 May 2019

Basic information about the TSS


TSS ID:hg_101024.1
Species:human
Chr:chr9
TSS Classification:yes
Start:74952827
End:74952901
Strand:-
TSS Score:1
Start of the center position in the TSS region:74952864
End of the center position in the TSS region:74952865



Gene and protein annotation


Transcript_name:ENST00000376854.5 NM_017998 uc004ajo.5 AK000972 AK225349
Distance:0
GeneID:55071
HGNC/MGI_ID:HGNC:23433
UniProt_ID:Q8IXQ3
Gene_name:chromosome 9 open reading frame 40
Gene_symbol:C9orf40
Gene_synonyms:FLJ10110
Gene_source:HGNC:23433



Transcript annotation


Transcript_name:ENST00000376854.5 NM_017998 uc004ajo.5 AK000972 AK225349
Distance:0
Num_trans:7
All_trans:ENST00000376854.5:0 NM_017998:0 uc004ajo.5:0 AK000972:0 AK225349:0 BC039588:8 KJ894122:216



TATA-Box annotation


Distance to TSS:22
Nearest PromoterID:NM_017998
Entrez ID:55071
Nearest Unigene:Hs.532296
Nearest Refseq:NM_017998
Nearest Ensembl:ENSG00000135045
Gene Name:chromosome 9 open reading frame 40
Gene Alias:-
Gene Description:chromosome 9 open reading frame 40
Gene Type:protein-coding
CpG%:0.155
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):