Difference between revisions of "TSS:Hg 14884.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000368445.9:0 ENST00000448116.6:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 uc001ffv.4:0 uc057ljk.1:0 uc001ffw.3:0 BC033925:0 BX647149:0 AK09...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=ENST00000368445.9:0 ENST00000448116.6:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 uc001ffv.4:0 uc057ljk.1:0 uc001ffw.3:0 BC033925:0 BX647149:0 AK096169:0 BC011813:0 BC017283:0 AK296786:0 U73377:17 BX647136:26 AK225332:65 AB451255:211 AB451379:211 AB527815:211 | |all_trans=ENST00000368445.9:0 ENST00000448116.6:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 uc001ffv.4:0 uc057ljk.1:0 uc001ffw.3:0 BC033925:0 BX647149:0 AK096169:0 BC011813:0 BC017283:0 AK296786:0 U73377:17 BX647136:26 AK225332:65 AB451255:211 AB451379:211 AB527815:211 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=154970754 | |end=154970754 | ||
| + | |end_of_center_position=154970746 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154970736 | |start=154970736 | ||
| + | |start_of_center_position=154970745 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000368445.9 ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc001ffv.4 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 BC011813 BC017283 AK296786 | |transcript_name=ENST00000368445.9 ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc001ffv.4 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 BC011813 BC017283 AK296786 | ||
Revision as of 09:29, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 154970745 |
|---|---|
| End of the center position in the TSS region: | 154970746 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000368445.9 ENST00000448116.6 ENST00000368449.8 NM_001130040 NM_183001 uc001ffv.4 uc057ljk.1 uc001ffw.3 BC033925 BX647149 AK096169 BC011813 BC017283 AK296786 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000368445.9:0 ENST00000448116.6:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 uc001ffv.4:0 uc057ljk.1:0 uc001ffw.3:0 BC033925:0 BX647149:0 AK096169:0 BC011813:0 BC017283:0 AK296786:0 U73377:17 BX647136:26 AK225332:65 AB451255:211 AB451379:211 AB527815:211 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
