Difference between revisions of "TSS:Hg 14891.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 uc057ljl.1:0 uc001ffx.4:0 uc057ljr.1:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 uc057ljl.1:0 uc001ffx.4:0 uc057ljr.1:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14 uc057ljq.1:14 X68148:24 NM_003029:-68 NM_001130041:-68 NM_001202859:-68 AK292143:-68 | |all_trans=ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 uc057ljl.1:0 uc001ffx.4:0 uc057ljr.1:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14 uc057ljq.1:14 X68148:24 NM_003029:-68 NM_001130041:-68 NM_001202859:-68 AK292143:-68 | ||
|chr=chr1 | |chr=chr1 | ||
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|distance_to_tss=101 | |distance_to_tss=101 | ||
|end=154974415 | |end=154974415 | ||
| + | |end_of_center_position=154974383 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154974349 | |start=154974349 | ||
| + | |start_of_center_position=154974382 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 uc057ljl.1 uc001ffx.4 uc057ljr.1 BC014158 AK315842 AK130014 | |transcript_name=ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 uc057ljl.1 uc001ffx.4 uc057ljr.1 BC014158 AK315842 AK130014 | ||
Revision as of 09:30, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 154974382 |
|---|---|
| End of the center position in the TSS region: | 154974383 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 uc057ljl.1 uc001ffx.4 uc057ljr.1 BC014158 AK315842 AK130014 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 uc057ljl.1:0 uc001ffx.4:0 uc057ljr.1:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14 uc057ljq.1:14 X68148:24 NM_003029:-68 NM_001130041:-68 NM_001202859:-68 AK292143:-68 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_001130041 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
