Difference between revisions of "TSS:Hg 233185.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB208849:38 ENST00000444179.5:-255 uc057ljp.1:-255 ENST00000414115.5:-274 uc057ljo.1:-274 |chr=chr1 |cpg_percent=0.015 |distance=38 |distance_to_tss=212...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SHCA= | ||
|all_trans=AB208849:38 ENST00000444179.5:-255 uc057ljp.1:-255 ENST00000414115.5:-274 uc057ljo.1:-274 | |all_trans=AB208849:38 ENST00000444179.5:-255 uc057ljp.1:-255 ENST00000414115.5:-274 uc057ljo.1:-274 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=2128 | |distance_to_tss=2128 | ||
|end=154968619 | |end=154968619 | ||
| + | |end_of_center_position=155745804 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=154968618 | |start=154968618 | ||
| + | |start_of_center_position=155745803 | ||
|strand=- | |strand=- | ||
|transcript_name=AB208849 | |transcript_name=AB208849 | ||
Revision as of 09:48, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 155745803 |
|---|---|
| End of the center position in the TSS region: | 155745804 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB208849 |
|---|---|
| Distance: | 38 |
| Num_trans: | 5 |
| All_trans: | AB208849:38 ENST00000444179.5:-255 uc057ljp.1:-255 ENST00000414115.5:-274 uc057ljo.1:-274 |
TATA-Box annotation
| Distance to TSS: | 2128 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 1 |
| Gene Alias: | SHC |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
