Difference between revisions of "TSS:Hg 101937.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=58 | |distance_to_tss=58 | ||
|end=110579833 | |end=110579833 | ||
| + | |end_of_center_position=110579823 | ||
|entrez_id=79987 | |entrez_id=79987 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=C9orf13 | + | |gene_alias=C9orf13 |
|gene_description="sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" | |gene_description="sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" | ||
|gene_id=79987 | |gene_id=79987 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=110579811 | |start=110579811 | ||
| + | |start_of_center_position=110579822 | ||
|strand=- | |strand=- | ||
|tata_box="-3(CATTTTATAGGC,+,0.00)" | |tata_box="-3(CATTTTATAGGC,+,0.00)" | ||
Revision as of 11:13, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 110579822 |
|---|---|
| End of the center position in the TSS region: | 110579823 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK122605 |
|---|---|
| Distance: | -43 |
| Num_trans: | 11 |
| All_trans: | AK122605:-43 ENST00000401783.6:-47 ENST00000374461.1:-47 NM_153366:-47 uc064vae.1:-47 uc004beu.2:-47 BC030816:-47 ENST00000374469.5:74 uc010mtz.4:74 AJ619977:106 AY243503:106 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_153366 |
| Entrez ID: | 79987 |
| Nearest Unigene: | Hs.522334 |
| Nearest Refseq: | NM_153366 |
| Nearest Ensembl: | ENSG00000165124 |
| Gene Name: | "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" |
| Gene Alias: | C9orf13 |
| Gene Description: | "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-3(CATTTTATAGGC,+,0.00)" |
