Difference between revisions of "TSS:Hg 6365.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000627490.2:0 uc010pku.3:0 AK299673:0 BC101578:10 BC143435:10 BC143451:10 M86546:-39 AK291415:-61 ENST00000498497.2:62 ENST00000367897.5:62 ENST00...") |
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|distance_to_tss=390 | |distance_to_tss=390 | ||
|end=164559761 | |end=164559761 | ||
| + | |end_of_center_position=164559750 | ||
|entrez_id=5087 | |entrez_id=5087 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=164559738 | |start=164559738 | ||
| + | |start_of_center_position=164559749 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000627490.2 uc010pku.3 AK299673 | |transcript_name=ENST00000627490.2 uc010pku.3 AK299673 | ||
Revision as of 12:14, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 164559749 |
|---|---|
| End of the center position in the TSS region: | 164559750 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000627490.2 uc010pku.3 AK299673 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000627490.2:0 uc010pku.3:0 AK299673:0 BC101578:10 BC143435:10 BC143451:10 M86546:-39 AK291415:-61 ENST00000498497.2:62 ENST00000367897.5:62 ENST00000559240.5:62 uc057mxb.1:62 uc001gcs.4:62 uc057mxc.1:62 BT006705:62 AB384885:62 ENST00000420696.6:-104 uc001gct.4:-104 ENST00000605467.1:252 uc057mxd.1:252 ENST00000340699.7:-332 uc057mxa.1:-332 NM_001204963:-379 NM_001204961:-379 NM_002585:-379 |
TATA-Box annotation
| Distance to TSS: | 390 |
|---|---|
| Nearest PromoterID: | NM_002585 |
| Entrez ID: | 5087 |
| Nearest Unigene: | Hs.557097 |
| Nearest Refseq: | NM_002585 |
| Nearest Ensembl: | ENSG00000185630 |
| Gene Name: | pre-B-cell leukemia homeobox 1 |
| Gene Alias: | - |
| Gene Description: | PBX homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
