Difference between revisions of "TSS:Hg 7246.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK127980:-4 ENST00000367500.8:12 NM_017673:12 uc001grh.5:12 BC030781:12 ENST00000367501.7:-46 uc001grg.5:-46 AK315802:46 NM_001105518:-66 AK291443:146 E...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HsSwt1= | ||
|all_trans=AK127980:-4 ENST00000367500.8:12 NM_017673:12 uc001grh.5:12 BC030781:12 ENST00000367501.7:-46 uc001grg.5:-46 AK315802:46 NM_001105518:-66 AK291443:146 ENST00000450350.1:335 uc057nxr.1:335 | |all_trans=AK127980:-4 ENST00000367500.8:12 NM_017673:12 uc001grh.5:12 BC030781:12 ENST00000367501.7:-46 uc001grg.5:-46 AK315802:46 NM_001105518:-66 AK291443:146 ENST00000450350.1:335 uc057nxr.1:335 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
|end=185157147 | |end=185157147 | ||
| + | |end_of_center_position=185157137 | ||
|entrez_id=54823 | |entrez_id=54823 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=C1orf26 | + | |gene_alias=C1orf26 |
|gene_description="SWT1, RNA endoribonuclease homolog" | |gene_description="SWT1, RNA endoribonuclease homolog" | ||
|gene_id=54823 | |gene_id=54823 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=185157125 | |start=185157125 | ||
| + | |start_of_center_position=185157136 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK127980 | |transcript_name=AK127980 | ||
Revision as of 14:41, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 185157136 |
|---|---|
| End of the center position in the TSS region: | 185157137 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK127980 |
|---|---|
| Distance: | -4 |
| Num_trans: | 12 |
| All_trans: | AK127980:-4 ENST00000367500.8:12 NM_017673:12 uc001grh.5:12 BC030781:12 ENST00000367501.7:-46 uc001grg.5:-46 AK315802:46 NM_001105518:-66 AK291443:146 ENST00000450350.1:335 uc057nxr.1:335 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_017673 |
| Entrez ID: | 54823 |
| Nearest Unigene: | Hs.134183 |
| Nearest Refseq: | NM_017673 |
| Nearest Ensembl: | ENSG00000116668 |
| Gene Name: | "SWT1, RNA endoribonuclease homolog" |
| Gene Alias: | C1orf26 |
| Gene Description: | "SWT1, RNA endoribonuclease homolog" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
