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Difference between revisions of "TSS:Hg 102983.1"

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Line 6: Line 6:
 
|distance_to_tss=16
 
|distance_to_tss=16
 
|end=133336218
 
|end=133336218
 +
|end_of_center_position=133336194
 
|entrez_id=6838
 
|entrez_id=6838
 
|gc_percent=0.701493
 
|gc_percent=0.701493
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=133336169
 
|start=133336169
 +
|start_of_center_position=133336193
 
|strand=-
 
|strand=-
 
|transcript_name=NR_103874 NM_006753 NM_001278942 AK054884
 
|transcript_name=NR_103874 NM_006753 NM_001278942 AK054884

Revision as of 14:56, 11 May 2019

Basic information about the TSS


TSS ID:hg_102983.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133336169
End:133336218
Strand:-
TSS Score:1
Start of the center position in the TSS region:133336193
End of the center position in the TSS region:133336194



Gene and protein annotation


Transcript_name:NR_103874 NM_006753 NM_001278942 AK054884
Distance:0
GeneID:6838
HGNC/MGI_ID:HGNC:11478
UniProt_ID:B3KNS8 O75683
Gene_name:surfeit 6
Gene_symbol:SURF6
Gene_synonyms:FLJ30322 RRP14
Gene_source:HGNC:11478



Transcript annotation


Transcript_name:NR_103874 NM_006753 NM_001278942 AK054884
Distance:0
Num_trans:12
All_trans:NR_103874:0 NM_006753:0 NM_001278942:0 AK054884:0 BC014878:9 EU831789:29 EU831867:29 BC003001:33 BC006197:33 KJ892233:37 ENST00000372022.5:-180 uc004cdb.6:-180



TATA-Box annotation


Distance to TSS:16
Nearest PromoterID:NR_103874
Entrez ID:6838
Nearest Unigene:Hs.274430
Nearest Refseq:NM_006753
Nearest Ensembl:ENSG00000148296
Gene Name:surfeit 6
Gene Alias:RRP14
Gene Description:surfeit 6
Gene Type:protein-coding
CpG%:0.135
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):