Difference between revisions of "TSS:Hg 243451.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_005347:-16 X87949:20 AK293604:25 ENST00000324460.6:38 uc004bpn.4:38 BC020235:38 AJ271729:229 EU794617:229 AF216292:242 DQ892173:242 DQ895368:242 AB52...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GRP78= | ||
| + | |HEL-S-89n= | ||
| + | |MIF2= | ||
|all_trans=NM_005347:-16 X87949:20 AK293604:25 ENST00000324460.6:38 uc004bpn.4:38 BC020235:38 AJ271729:229 EU794617:229 AF216292:242 DQ892173:242 DQ895368:242 AB527282:242 AF188611:298 | |all_trans=NM_005347:-16 X87949:20 AK293604:25 ENST00000324460.6:38 uc004bpn.4:38 BC020235:38 AJ271729:229 EU794617:229 AF216292:242 DQ892173:242 DQ895368:242 AB527282:242 AF188611:298 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=125241371 | |end=125241371 | ||
| + | |end_of_center_position=1463 | ||
|entrez_id=3309 | |entrez_id=3309 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=BIP | + | |gene_alias=BIP |
|gene_description=heat shock protein family A (Hsp70) member 5 | |gene_description=heat shock protein family A (Hsp70) member 5 | ||
|gene_id=3309 | |gene_id=3309 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=125241367 | |start=125241367 | ||
| + | |start_of_center_position=1462 | ||
|strand=- | |strand=- | ||
|tata_box="-7(GGGTATATAAGC,-,0.00)" | |tata_box="-7(GGGTATATAAGC,-,0.00)" | ||
Revision as of 16:27, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1462 |
|---|---|
| End of the center position in the TSS region: | 1463 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_005347 |
|---|---|
| Distance: | -16 |
| Num_trans: | 13 |
| All_trans: | NM_005347:-16 X87949:20 AK293604:25 ENST00000324460.6:38 uc004bpn.4:38 BC020235:38 AJ271729:229 EU794617:229 AF216292:242 DQ892173:242 DQ895368:242 AB527282:242 AF188611:298 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_005347 |
| Entrez ID: | 3309 |
| Nearest Unigene: | Hs.743241 |
| Nearest Refseq: | NM_005347 |
| Nearest Ensembl: | ENSG00000044574 |
| Gene Name: | heat shock protein family A (Hsp70) member 5 |
| Gene Alias: | BIP |
| Gene Description: | heat shock protein family A (Hsp70) member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(GGGTATATAAGC,-,0.00)" |
