Difference between revisions of "TSS:Hg 243536.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK297623:-136 |chr=chr9 |cpg_percent=0.015 |distance=-136 |distance_to_tss=27861 |end=137522708 |entrez_id=375775 |gc_percent=0.517413 |gene_alias=C9orf...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NTE-R1= | ||
| + | |NTEL1= | ||
|all_trans=AK297623:-136 | |all_trans=AK297623:-136 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=27861 | |distance_to_tss=27861 | ||
|end=137522708 | |end=137522708 | ||
| + | |end_of_center_position=2939 | ||
|entrez_id=375775 | |entrez_id=375775 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=C9orf111 | + | |gene_alias=C9orf111 |
|gene_description=patatin like phospholipase domain containing 7 | |gene_description=patatin like phospholipase domain containing 7 | ||
|gene_id=375775 | |gene_id=375775 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=137522707 | |start=137522707 | ||
| + | |start_of_center_position=2938 | ||
|strand=- | |strand=- | ||
|transcript_name=AK297623 | |transcript_name=AK297623 | ||
Revision as of 16:36, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 2938 |
|---|---|
| End of the center position in the TSS region: | 2939 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK297623 |
|---|---|
| Distance: | -136 |
| Num_trans: | 1 |
| All_trans: | AK297623:-136 |
TATA-Box annotation
| Distance to TSS: | 27861 |
|---|---|
| Nearest PromoterID: | NM_001098537 |
| Entrez ID: | 375775 |
| Nearest Unigene: | Hs.294147 |
| Nearest Refseq: | NM_152286 |
| Nearest Ensembl: | ENSG00000130653 |
| Gene Name: | patatin like phospholipase domain containing 7 |
| Gene Alias: | C9orf111 |
| Gene Description: | patatin like phospholipase domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
