Difference between revisions of "TSS:Mm 100893.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109813.8:21 ENSMUST00000090443.9:21 NM_007595:21 NM_001174054:21 NM_001174053:21 uc007hxs.2:21 uc007hxr.2:21 uc007hxt.2:21 AK046454:21 ENSMU...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-26 | |distance_to_tss=-26 | ||
|end=6065779 | |end=6065779 | ||
| + | |end_of_center_position=6065774 | ||
|entrez_id=12323 | |entrez_id=12323 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=6065768 | |start=6065768 | ||
| + | |start_of_center_position=6065773 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109813.8 ENSMUST00000090443.9 NM_007595 NM_001174054 NM_001174053 uc007hxs.2 uc007hxr.2 uc007hxt.2 AK046454 | |transcript_name=ENSMUST00000109813.8 ENSMUST00000090443.9 NM_007595 NM_001174054 NM_001174053 uc007hxs.2 uc007hxr.2 uc007hxt.2 AK046454 | ||
Revision as of 20:54, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 6065773 |
|---|---|
| End of the center position in the TSS region: | 6065774 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109813.8 ENSMUST00000090443.9 NM_007595 NM_001174054 NM_001174053 uc007hxs.2 uc007hxr.2 uc007hxt.2 AK046454 |
|---|---|
| Distance: | 21 |
| Num_trans: | 24 |
| All_trans: | ENSMUST00000109813.8:21 ENSMUST00000090443.9:21 NM_007595:21 NM_001174054:21 NM_001174053:21 uc007hxs.2:21 uc007hxr.2:21 uc007hxt.2:21 AK046454:21 ENSMUST00000002817.11:27 ENSMUST00000129098.1:111 AK048845:111 ENSMUST00000019133.10:157 ENSMUST00000093355.11:187 ENSMUST00000101586.2:199 AK163698:205 ENSMUST00000109815.8:206 ENSMUST00000109812.8:206 X63615:206 BC024803:206 BC080273:219 ENSMUST00000066431.13:224 ENSMUST00000101585.9:231 ENSMUST00000154197.7:231 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_007595 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Alias: | CaMKII |
| Gene Description: | "calcium/calmodulin-dependent protein kinase II, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
