Difference between revisions of "TSS:Mm 100944.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000147762.7:0 ENSMUST00000134527.1:0 NR_045893:0 uc029rkn.1:0 uc007hyu.2:0 AK032971:0 AK160548:0 ENSMUST00000124818.1:267 |chr=chr11 |cpg_perce...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000005115= | ||
|all_trans=ENSMUST00000147762.7:0 ENSMUST00000134527.1:0 NR_045893:0 uc029rkn.1:0 uc007hyu.2:0 AK032971:0 AK160548:0 ENSMUST00000124818.1:267 | |all_trans=ENSMUST00000147762.7:0 ENSMUST00000134527.1:0 NR_045893:0 uc029rkn.1:0 uc007hyu.2:0 AK032971:0 AK160548:0 ENSMUST00000124818.1:267 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
|end=6528780 | |end=6528780 | ||
| + | |end_of_center_position=6528744 | ||
|entrez_id=100041286 | |entrez_id=100041286 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=Gm11974 | + | |gene_alias=Gm11974 |
|gene_description=small nucleolar RNA host gene 15 | |gene_description=small nucleolar RNA host gene 15 | ||
|gene_id=100041286 | |gene_id=100041286 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=6528707 | |start=6528707 | ||
| + | |start_of_center_position=6528743 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000147762.7 ENSMUST00000134527.1 NR_045893 uc029rkn.1 uc007hyu.2 AK032971 AK160548 | |transcript_name=ENSMUST00000147762.7 ENSMUST00000134527.1 NR_045893 uc029rkn.1 uc007hyu.2 AK032971 AK160548 | ||
Revision as of 21:04, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6528743 |
|---|---|
| End of the center position in the TSS region: | 6528744 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000147762.7 ENSMUST00000134527.1 NR_045893 uc029rkn.1 uc007hyu.2 AK032971 AK160548 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000147762.7:0 ENSMUST00000134527.1:0 NR_045893:0 uc029rkn.1:0 uc007hyu.2:0 AK032971:0 AK160548:0 ENSMUST00000124818.1:267 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NR_045893 |
| Entrez ID: | 100041286 |
| Nearest Unigene: | Mm.459507 |
| Nearest Refseq: | NR_045893 |
| Nearest Ensembl: | ENSMUSG00000085156 |
| Gene Name: | small nucleolar RNA host gene 15 |
| Gene Alias: | Gm11974 |
| Gene Description: | small nucleolar RNA host gene 15 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
