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Difference between revisions of "TSS:Hg 23476.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000295237.10:-40 uc061pfw.1:-40 AL832452:-40 AL832336:43 AL832011:84 AK092683:-199 CR627255:-303 AK096907:335 BX647645:349 AL831970:368 BX647845:4...")
 
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|distance_to_tss=61445
 
|distance_to_tss=61445
 
|end=167248734
 
|end=167248734
 +
|end_of_center_position=167248728
 
|entrez_id=129446
 
|entrez_id=129446
 
|gc_percent=0.422886
 
|gc_percent=0.422886
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|species=human
 
|species=human
 
|start=167248721
 
|start=167248721
 +
|start_of_center_position=167248727
 
|strand=+
 
|strand=+
 
|tata_box="-43(GCATATAAAAGA,-,0.00)"
 
|tata_box="-43(GCATATAAAAGA,-,0.00)"

Revision as of 21:15, 11 May 2019

Basic information about the TSS


TSS ID:hg_23476.1
Species:human
Chr:chr2
TSS Classification:yes
Start:167248721
End:167248734
Strand:+
TSS Score:1
Start of the center position in the TSS region:167248727
End of the center position in the TSS region:167248728



Gene and protein annotation


Transcript_name:ENST00000295237.10 uc061pfw.1 AL832452
Distance:-40
GeneID:129446
HGNC/MGI_ID:HGNC:14303
UniProt_ID:A0A0A0MQZ3
Gene_name:xin actin binding repeat containing 2
Gene_symbol:XIRP2
Gene_synonyms:
Gene_source:HGNC:14303



Transcript annotation


Transcript_name:ENST00000295237.10 uc061pfw.1 AL832452
Distance:-40
Num_trans:12
All_trans:ENST00000295237.10:-40 uc061pfw.1:-40 AL832452:-40 AL832336:43 AL832011:84 AK092683:-199 CR627255:-303 AK096907:335 BX647645:349 AL831970:368 BX647845:411 AL832360:463



TATA-Box annotation


Distance to TSS:61445
Nearest PromoterID:NM_001199145
Entrez ID:129446
Nearest Unigene:Hs.73680
Nearest Refseq:NM_152381
Nearest Ensembl:ENSG00000163092
Gene Name:xin actin binding repeat containing 2
Gene Alias:CMYA3
Gene Description:xin actin binding repeat containing 2
Gene Type:protein-coding
CpG%:0.015
GC%:0.422886
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-43(GCATATAAAAGA,-,0.00)"