Difference between revisions of "TSS:Hg 23476.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000295237.10:-40 uc061pfw.1:-40 AL832452:-40 AL832336:43 AL832011:84 AK092683:-199 CR627255:-303 AK096907:335 BX647645:349 AL831970:368 BX647845:4...") |
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Line 6: | Line 6: | ||
|distance_to_tss=61445 | |distance_to_tss=61445 | ||
|end=167248734 | |end=167248734 | ||
+ | |end_of_center_position=167248728 | ||
|entrez_id=129446 | |entrez_id=129446 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=167248721 | |start=167248721 | ||
+ | |start_of_center_position=167248727 | ||
|strand=+ | |strand=+ | ||
|tata_box="-43(GCATATAAAAGA,-,0.00)" | |tata_box="-43(GCATATAAAAGA,-,0.00)" |
Revision as of 21:15, 11 May 2019
Basic information about the TSS
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Start of the center position in the TSS region: | 167248727 |
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End of the center position in the TSS region: | 167248728 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000295237.10 uc061pfw.1 AL832452 |
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Distance: | -40 |
Num_trans: | 12 |
All_trans: | ENST00000295237.10:-40 uc061pfw.1:-40 AL832452:-40 AL832336:43 AL832011:84 AK092683:-199 CR627255:-303 AK096907:335 BX647645:349 AL831970:368 BX647845:411 AL832360:463 |
TATA-Box annotation
Distance to TSS: | 61445 |
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Nearest PromoterID: | NM_001199145 |
Entrez ID: | 129446 |
Nearest Unigene: | Hs.73680 |
Nearest Refseq: | NM_152381 |
Nearest Ensembl: | ENSG00000163092 |
Gene Name: | xin actin binding repeat containing 2 |
Gene Alias: | CMYA3 |
Gene Description: | xin actin binding repeat containing 2 |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.422886 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-43(GCATATAAAAGA,-,0.00)" |