Difference between revisions of "TSS:Hg 219988.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000380433.4:98 uc001ihx.2:98 NM_053049:102 BC100867:181 BC100868:181 BC100869:181 BC100870:181 |chr=chr10 |cpg_percent=0.04 |distance=98 |distance...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SPC= | ||
| + | |UCNIII= | ||
|all_trans=ENST00000380433.4:98 uc001ihx.2:98 NM_053049:102 BC100867:181 BC100868:181 BC100869:181 BC100870:181 | |all_trans=ENST00000380433.4:98 uc001ihx.2:98 NM_053049:102 BC100867:181 BC100868:181 BC100869:181 BC100870:181 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-98 | |distance_to_tss=-98 | ||
|end=5364911 | |end=5364911 | ||
| + | |end_of_center_position=5364911 | ||
|entrez_id=114131 | |entrez_id=114131 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=SCP | + | |gene_alias=SCP |
|gene_description=urocortin 3 | |gene_description=urocortin 3 | ||
|gene_id=114131 | |gene_id=114131 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=5364910 | |start=5364910 | ||
| + | |start_of_center_position=5364910 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000380433.4 uc001ihx.2 | |transcript_name=ENST00000380433.4 uc001ihx.2 | ||
Revision as of 23:06, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5364910 |
|---|---|
| End of the center position in the TSS region: | 5364911 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380433.4 uc001ihx.2 |
|---|---|
| Distance: | 98 |
| Num_trans: | 7 |
| All_trans: | ENST00000380433.4:98 uc001ihx.2:98 NM_053049:102 BC100867:181 BC100868:181 BC100869:181 BC100870:181 |
TATA-Box annotation
| Distance to TSS: | -98 |
|---|---|
| Nearest PromoterID: | NM_053049 |
| Entrez ID: | 114131 |
| Nearest Unigene: | Hs.511775 |
| Nearest Refseq: | NM_053049 |
| Nearest Ensembl: | ENSG00000178473 |
| Gene Name: | urocortin 3 |
| Gene Alias: | SCP |
| Gene Description: | urocortin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
