Difference between revisions of "TSS:Mm 101686.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK162087:0 AK075947:0 AK075600:23 ENSMUST00000135617.1:-39 ENSMUST00000101347.9:-255 NM_001199274:-255 uc007ilq.2:-255 |chr=chr11 |cpg_percent=0.07 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2410018D16Rik= | ||
| + | |AI182287= | ||
| + | |AU022853= | ||
| + | |MAT-II= | ||
| + | |MATIIbeta= | ||
| + | |TGR= | ||
|all_trans=AK162087:0 AK075947:0 AK075600:23 ENSMUST00000135617.1:-39 ENSMUST00000101347.9:-255 NM_001199274:-255 uc007ilq.2:-255 | |all_trans=AK162087:0 AK075947:0 AK075600:23 ENSMUST00000135617.1:-39 ENSMUST00000101347.9:-255 NM_001199274:-255 uc007ilq.2:-255 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=265 | |distance_to_tss=265 | ||
|end=40694948 | |end=40694948 | ||
| + | |end_of_center_position=40694939 | ||
|entrez_id=108645 | |entrez_id=108645 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=1110064C04Rik | + | |gene_alias=1110064C04Rik |
|gene_description="methionine adenosyltransferase II, beta" | |gene_description="methionine adenosyltransferase II, beta" | ||
|gene_id=108645 | |gene_id=108645 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=40694928 | |start=40694928 | ||
| + | |start_of_center_position=40694938 | ||
|strand=- | |strand=- | ||
|tata_box="-36(TAATTTAAAAGG,-,0.00)" | |tata_box="-36(TAATTTAAAAGG,-,0.00)" | ||
Revision as of 23:23, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 40694938 |
|---|---|
| End of the center position in the TSS region: | 40694939 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK162087 AK075947 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | AK162087:0 AK075947:0 AK075600:23 ENSMUST00000135617.1:-39 ENSMUST00000101347.9:-255 NM_001199274:-255 uc007ilq.2:-255 |
TATA-Box annotation
| Distance to TSS: | 265 |
|---|---|
| Nearest PromoterID: | NM_001199274 |
| Entrez ID: | 108645 |
| Nearest Unigene: | Mm.293771 |
| Nearest Refseq: | NM_134017 |
| Nearest Ensembl: | ENSMUSG00000042032 |
| Gene Name: | "methionine adenosyltransferase II, beta" |
| Gene Alias: | 1110064C04Rik |
| Gene Description: | "methionine adenosyltransferase II, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(TAATTTAAAAGG,-,0.00)" |
